| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5045 |
|---|
| Symbol | |
|---|
| ID | 4583606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 557500 |
|---|
| End bp | 558684 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639772348 |
|---|
| Product | (S)-2-hydroxy-acid oxidase |
|---|
| Protein accession | YP_918801 |
|---|
| Protein GI | 119387767 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCACA CCCGCCACGC CGTCAACATC GACGAGATCG AACGGGCGGC GCGGCGCTAT
CTGCCGGGTT TCCTGTTCGA TTTCATCGCC GGCGGCGTCG ATGGCGAGGC GGGGCTCATG
CGCAACAGGC AGGCATTCGC CCGCCACCGG CTGGTGCCGC GCTATCTGCG CGACGTCTCG
CGCCGCTCGC TGAGTACCCG CATTCTGGGC CGTGACTACG CGATGCCCCT GGGCATCTCG
CCGACCGGCC CGGCGCAACT GTTCCGCCGC GATGCCGACC GGATGCTGGC TCGCGCCGCA
CGCGAGGCCG ACATTCCCTT CGTCCTGTCC GGCGCCGCCG GTGCCTCGCT CGAGGAAATC
ACCCGGATCG CGCCGGAACA CGGCTGGTTC CAGCTTTATC CCGCCCGCGA CCGGGCCATC
ACCCGCGACC AGATCCGCCG CGCCGCCGAT GCCGGCACCC CGGCCCTGGT GCTGACCGTC
GATACGCCGG TGACACCCAA GCGCGAACGA CACCTGCGCA ACCGGATCTC GGTCCCGTTC
CGGCCCGGCC CGGCGCTGTG GCCGCGCCTT GCGAAAGAGG TGCTGCTGCA CCCGGAATGG
TTCCTGCGCT TTCTGCTGGG CGGCGGCATG GAGGCGATGG GCAACTGGGC GCCCTATGCG
CCCAAGGGGG CCGGCGCCTC GGAAATCGCG GCCTTTTTCT TTGACCAGGC CTTCGCGCCG
GGCGAAAGCG GCACGTTGTG CTGGCAAGAC CTTGAAGCCT GCCGCGCCCT CTGGCCCGGG
CCGCTGATCG TCAAGGGCAT CCTGCACCCC GAGGATGCCC GACGCGCGGC CTCGCTTGGC
GCGGATGCGA TCATGGTCTC GAACCACGGC GGCAAGGCGC TGGATGCGGC ACCCGCAGCG
CTGGACATGC TGCCGGCGAT CCGGCACGCG GTGGGACCGG ATTATCCACT GTTCCTTGAC
AGCGGCGTGC GGCGCGGGTC GGATATCGTC ATCGCGCTGT GCCTTGGCGC GGATTTCGTC
TTTGCCGGCC GGCCGACGCT TTACGGCACC GCCGCCGGAG CCGAGGCGGG GGCCCGCAAG
GCCCTGTCCA TCCTGCGGCA GGAAACCGAT CTGGTCATGG CCGGAATCGG CTGCACCTCG
CCGGCGGAGC TGGGGCCTGA TTATCTGACA ATGGGGGACG CGTGA
|
|---|
| Protein sequence | MDHTRHAVNI DEIERAARRY LPGFLFDFIA GGVDGEAGLM RNRQAFARHR LVPRYLRDVS
RRSLSTRILG RDYAMPLGIS PTGPAQLFRR DADRMLARAA READIPFVLS GAAGASLEEI
TRIAPEHGWF QLYPARDRAI TRDQIRRAAD AGTPALVLTV DTPVTPKRER HLRNRISVPF
RPGPALWPRL AKEVLLHPEW FLRFLLGGGM EAMGNWAPYA PKGAGASEIA AFFFDQAFAP
GESGTLCWQD LEACRALWPG PLIVKGILHP EDARRAASLG ADAIMVSNHG GKALDAAPAA
LDMLPAIRHA VGPDYPLFLD SGVRRGSDIV IALCLGADFV FAGRPTLYGT AAGAEAGARK
ALSILRQETD LVMAGIGCTS PAELGPDYLT MGDA
|
|---|
| |