Gene Pden_5034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5034 
Symbol 
ID4583595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp545354 
End bp546376 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content63% 
IMG OID639772337 
Productinitiator RepB protein 
Protein accessionYP_918790 
Protein GI119387756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGT CGGCGATTCG AACGGTCGAG GCGCGTCCGA ATGCGGACAG TCTGATCAAG 
CCGGGCGAGC TTGTCGACCT CATCGAGGTC ACGCCCCTGA CGTTGAACGA CCGGCGCATC
TATAACCAGC TTCTGGAGAA CGCCTGGGAA GCGATCGACA AGCCGGTGAC GCATGTCATC
GCGAAATCTG CGCTGCGGGG CAGCCATAAC TCGAATGACC GTGTCGGCGA AAGCCTTGAA
AGGCTGATGT CGGCCATCGT GAAGGTCGCG GTGATCTGGG ATGGCGAGCC GGCGATCGAG
CGGGTGCAGC TTTTGGGCGG CAACCTGGAA AGCGGCAGAA GCGACGGGCT GCTGGAATAT
GAGATCCCCG CACGGCTTCG CAAGATCATC CGCAACAGCC AGGTCTTTGC CCGATTGCAG
CGCGAGGTGA TGTTTGCGCT GTCCTCGAAA TACGCGCTGA CCCTTTACGA GATGGTGCAG
AAGCGCGGCA ACCTGCGCTG GAAGGCGTCG GAGCGTTTCA CGCTCGAGGC ACTGCGGGGA
ATCATGGGCG TCCCGAAAGG TAAGCTTTCG TCCTGGTCGA ACCTGAAGCT GCGCGCCATC
GACCCGGCGG TGGCCGAGGT GAACGCGCTT TCCGACTACA TGGTCGAGAT CTCTCCGATC
AAGACCGGGC GCGCCGTGAC CCATGTCGAG ATGCGCTGGT GGCGCAAGGA TGGCGATGCC
AGCGGCGCAG CGGACCGGGC GCTGCAATTC TCGAAAGTCG GAAGGCGGGT CAAGGCTGAA
GGCAGGACCG AGCAGGTCGC GGTGGGGCAG GAGGCGCGGC CACGCCCGGG TTGGCTGGAT
TCTCGCGGAC CAGCCCTGCA AACGGCGACA TACGAGACGG CTCGGCTACG TCACCCGGGC
TATGATATCT ATTTCGTCGA GGGCGAATGG CGCAGCTGGA TGGCGGGCAA GGAGCCTGCG
AAGGATCCCG ACCGCGCCTT CCTGGCATTC TTCCGCAGCT ATGCCGAAAA GAACCCGCTT
TAG
 
Protein sequence
MAESAIRTVE ARPNADSLIK PGELVDLIEV TPLTLNDRRI YNQLLENAWE AIDKPVTHVI 
AKSALRGSHN SNDRVGESLE RLMSAIVKVA VIWDGEPAIE RVQLLGGNLE SGRSDGLLEY
EIPARLRKII RNSQVFARLQ REVMFALSSK YALTLYEMVQ KRGNLRWKAS ERFTLEALRG
IMGVPKGKLS SWSNLKLRAI DPAVAEVNAL SDYMVEISPI KTGRAVTHVE MRWWRKDGDA
SGAADRALQF SKVGRRVKAE GRTEQVAVGQ EARPRPGWLD SRGPALQTAT YETARLRHPG
YDIYFVEGEW RSWMAGKEPA KDPDRAFLAF FRSYAEKNPL