Gene Pden_5014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5014 
Symbol 
ID4583575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp524976 
End bp526130 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID639772317 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_918770 
Protein GI119387736 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTTA CCACGATCAC CACCCAACTC GACGAAATCG GAATTGCGCA AAGGCTGGCC 
GACGAATTCG CGGTCGCCGC AGCACAGGAC GACCGCGCGG CCGGCTTCCC GTTCCGGCAT
ATCGAGGCGC TGCGCGAAAG TGGGCTGCTG GCGCTGACCG CCCCGCAGCA ATTCGGCGGC
AGGGGCGGCG GGCTTGAGAT CGCGGCACAG GTCATCCGCG AGATCGGCCG GGGCGACCCG
GCCATCGGCC TGGTGCTGGT GATGCAATAT GCCCATCTGG CATTGCTTCA TCGTGGACGC
TGGCCGGCCG CGCTGGTGGC CCGTGTCGTG CGCGACGCCG CCACCGAGGG CGCGCTGATC
AACGCGCTGC GCGTCGAGCC CGAGCTTGGC ACGCCGATGC GCGGCGGCCT GCCGGCCACC
GTCGCCCGCC GGATCGACAA CGGCTGGCTG CTTTCCGGCC GCAAGATCTA TTCGACCGGC
AGCGAGGGGC TGCGCTGGGC CATCGTCTGG GCTCGCACGG ACGAGGACGA GGCCCGCGTA
GGGCAGTTTC TCGTCCCGAT GCAAGCCGAC GGCGTGCGGA TCATCCCGAC CTGGGACACG
CTGGGGCTGC GCGCATCCTC GAGCCACGAC GTGCAGTTCG ACGAAGTGCT GCTGCCGCCC
GATTACGCAG TGGACATCCG GCGCCCGGCG GAATGGGCCG TTCGAGGCGA CGAGACCTCG
GCCTGGGTCA GCCTGCTGAT CGCCGCGCTT TATACCGGCG TCGCCGAGGC GGGGCGCGAC
TGGATCGTCG CCTTCCTGAA ATCGCGCGTG CCTGCCAATC TGGGCAAGCC GCTGGCCGAA
CTGCCCCGGA TGCAGGAGGC GGTCGGTGCC ATCGAGGAAC GCATCGCCGT CAATCGCCGG
CTGATCGGCT CGGCCGCCCG GGACATGGAT GCGGGGCAGG TGCCTGCGGC GAGCCAGTCC
GGGCTCATCA AGCATGTCGC CACCGAAAAC GCCATCGCTG CCGTCGAGGG CGCGCTGAAG
CTGGCCGGCA ATCACGGCAT CGCCCGCCGA AACCCGCTGG AACGCCATTA CCGCGATGTT
CTGTGCGGCC GCATCCACAG TCCGCAAGAG GACAGCGTCC TGGTCGCCGC CGGACGCGCC
GTCCTTGGTC TTTGA
 
Protein sequence
MLLTTITTQL DEIGIAQRLA DEFAVAAAQD DRAAGFPFRH IEALRESGLL ALTAPQQFGG 
RGGGLEIAAQ VIREIGRGDP AIGLVLVMQY AHLALLHRGR WPAALVARVV RDAATEGALI
NALRVEPELG TPMRGGLPAT VARRIDNGWL LSGRKIYSTG SEGLRWAIVW ARTDEDEARV
GQFLVPMQAD GVRIIPTWDT LGLRASSSHD VQFDEVLLPP DYAVDIRRPA EWAVRGDETS
AWVSLLIAAL YTGVAEAGRD WIVAFLKSRV PANLGKPLAE LPRMQEAVGA IEERIAVNRR
LIGSAARDMD AGQVPAASQS GLIKHVATEN AIAAVEGALK LAGNHGIARR NPLERHYRDV
LCGRIHSPQE DSVLVAAGRA VLGL