Gene Pden_4985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4985 
Symbol 
ID4583546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp495557 
End bp496534 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID639772288 
Productpyruvate dehydrogenase (acetyl-transferring) 
Protein accessionYP_918741 
Protein GI119387707 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.699955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATC CGTTTCCGCT GCCGAAAGAG CAGCTTCTGG ACGCCTATCG CAAGATGAAG 
ACCATCCGCG ATTTCGAAGA GCGGCTGCAT GTCGATTTCG CCCGCGGCGA GATCCCCGGC
TTCGTCCACC TTTATGCCGG GGAGGAGGCG ACGGCGGTCG GCATCATGAT GCATCTGCAC
GACCGAGACC GCATCGCCTC GACCCATCGC GGCCACGGCC ATTGCATCGC CAAGGGCGTC
GACGTCAAGG CGATGATGGC CGAGATCTAT GGCAAGGCCA CCGGCTGCTG CGCGGGCAAG
GGCGGCTCGA TGCATATCGC CGACCTGTCC TTGGGGATGA TGGGCGCGAA CGGCATCCTG
GGCGCCGGTG CGCCGCTGGT TTGCGGCGCG GCGCTGGCGG CGCAGAAGCT GGGCCATGAC
GGCGTCGGCA TCACCTTCTT CGGCGACGGC GCCTCGAACC AGGGCACGGT GCTGGAAAGC
ATGAACCTGG CCGCGATCTG GAACCTGCCG GCGATCTTCG TGGTCGAGAA CAACGGCTAT
GCCGAATCGA CCTCGGTCGA TTACGCCACC GCCTCGGACA GCTATGTGGA CCGGGCGACC
GGCTTCGGCA TGCCGGGGAT CACCGTGGAC GGGCTGGATT TCTTTGCCGT CTACGAGGCG
GCGGGCGAGG TCATCCGCCG CGCCCGCGAA GGCGCCGGGC CGACGCTGCT GGAATGCAAG
AACGTGCGCT TCTTCGGCCA TTTCGAGGGC GACGCCCAGA CCTACAAGGC GCCGGGCGAG
AACGAATACA ACCGCGCCAA CAACGATTGC CTGAAGCTGT TCCGCCAGAA GGTGACCGAG
GCCGGGGTGA TCTCGGAGTC CGAGCTGGAC GCCATCGACG CCGAAGTGGC GCAGTTGATC
GACGAGGCCG TGGCCGAGGC CATCGCCGCG CCGCTGCCCG GCCCCGAGCA GCTGACCACC
GACGTCTATG TGAACTGA
 
Protein sequence
MSNPFPLPKE QLLDAYRKMK TIRDFEERLH VDFARGEIPG FVHLYAGEEA TAVGIMMHLH 
DRDRIASTHR GHGHCIAKGV DVKAMMAEIY GKATGCCAGK GGSMHIADLS LGMMGANGIL
GAGAPLVCGA ALAAQKLGHD GVGITFFGDG ASNQGTVLES MNLAAIWNLP AIFVVENNGY
AESTSVDYAT ASDSYVDRAT GFGMPGITVD GLDFFAVYEA AGEVIRRARE GAGPTLLECK
NVRFFGHFEG DAQTYKAPGE NEYNRANNDC LKLFRQKVTE AGVISESELD AIDAEVAQLI
DEAVAEAIAA PLPGPEQLTT DVYVN