| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4939 |
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| Symbol | |
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| ID | 4583500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 443512 |
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| End bp | 444843 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639772242 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_918695 |
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| Protein GI | 119387661 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.258846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAGT TCGTCCGCAA GCTCGAGGCC CGTGGCGACC TGCTGGTCGT CGATCGCGAG
ATCGATCCCG CGCATGAGCT TGCCGCCGTC ACCCAGCTTG CGCAGAAGAA ATGGGCCAGG
CCGGTGATGT TCACCAATGT GAAGGGCACC CGCTTTCCTG TCGTGAGCAA CGTCTACAGC
ACGCGCGAGC GGCTGGGCGA GGTGATCGGC ATCGACGCCG CCGATTTCTG CCGGCAATGG
AGCAGGCTCT CATCGCTGGG CGCGGCAGAC ATGAAGCAGC CGCTTGTTGC CGCCGCCCCG
GCCAATCTGC CGGAATATGA AGAGGTCAGG CTCTCCGACC TGCCCCTCAT CACCTATTCC
GACCGCGATG GCGGGGCCTA TTTCACCTCG GCCATGTTCA TCGCGAAGGA TCCCGAGACG
GGGGTGGGCA ACCTGTCCTA TCACCGCTCG ATGTATATCG ACGACGGCGA GTTGCGCTGC
CGCCTTGCGC CGCGCCACCA TCTGACGATC TATCACGAGA AAGCCGAAAA GATGGGCCGG
CCGCTGGAAG CCGCGATGCT TATCGGACCA CCGGCCCATG CCTTCCTGAC CGCGGCCGCG
CCCTTGCCCT ATGACGTGGA CGAGCTCGAG GTAGCGGCCC GGCTGCGCGG CAAGCCCGTC
GCCATGCGCA AGTGCAACCA TATCGGCCTC GAGGTGCCGG CCGAGACCGA GGTGGTGATC
GAGGGCCGCT TCCTGCCCAA CGTCCGCCTG CCCGAAGGGC CATTCGGCGA ATTCATGGGC
TATTACGTGG CTGAGGCCCC CAATGCGGTC TTCCAGGTGC TGGGCGTCAC TGTGCGCAAG
GATGCGATGT TCCATTCCAT CCTTTGCGGC TCGCCCGAAG AGGTGCTGAC GCTGGAGCTT
TCGGTTTCGG CCAACATCTA CCAGCGGCTT TCCGCGGCCT TGCCGGGGAT CGTCAACGTC
ACCTGCCAGC CCTTCGTGAA CCATGCCGTC GTGCAGATCG AGCCGCAGTT CGAGGGCCAT
GCCCGCCAGG TCATGCTGGC CACCATCGGC GCCGAGCCGA TCTGGGCCAA GCAGATCACC
GTGGTCGATA CCGACGTGGA CATCTACGAC ATGGACGACG TGCAATGGGC GATCCTGACC
CGCTGCCGAC CCGACAAGGA CATGATGATC ATCCCCGAAA CCCCGTCCTT CTATCGCGAC
GAGCAAAAGG ACCACTGGGG CCGGCTTCTG GTCGATGCCA CCAAGCCATG GGGCCGCGAG
GCCGAGTTCG AGCGCAAGCG CCTGCGCCTT GGAGAACAGG TCCGCGCCGA AGACTGGTTC
CCGGGGCACT GA
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| Protein sequence | MREFVRKLEA RGDLLVVDRE IDPAHELAAV TQLAQKKWAR PVMFTNVKGT RFPVVSNVYS
TRERLGEVIG IDAADFCRQW SRLSSLGAAD MKQPLVAAAP ANLPEYEEVR LSDLPLITYS
DRDGGAYFTS AMFIAKDPET GVGNLSYHRS MYIDDGELRC RLAPRHHLTI YHEKAEKMGR
PLEAAMLIGP PAHAFLTAAA PLPYDVDELE VAARLRGKPV AMRKCNHIGL EVPAETEVVI
EGRFLPNVRL PEGPFGEFMG YYVAEAPNAV FQVLGVTVRK DAMFHSILCG SPEEVLTLEL
SVSANIYQRL SAALPGIVNV TCQPFVNHAV VQIEPQFEGH ARQVMLATIG AEPIWAKQIT
VVDTDVDIYD MDDVQWAILT RCRPDKDMMI IPETPSFYRD EQKDHWGRLL VDATKPWGRE
AEFERKRLRL GEQVRAEDWF PGH
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