Gene Pden_4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4883 
Symbol 
ID4583444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp387324 
End bp388133 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID639772186 
ProductABC transporter related 
Protein accessionYP_918639 
Protein GI119387605 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.641028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.709013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACG CCGTGCGTCT GGACAATGTC GACATCAGTT TCGGAGCGAC GGGGAAAAGC 
GTGTTCCGCG CAGTTGCCGG CGCAAATCTC AGCGTTGCGA AGGGCGAGTT CGTCGCGATC
GTCGGCCCGA CGGGCTCGGG AAAGTCGACG CTGCTGAACG CGGCCGCCGG CCTGCTGAAG
CCTTCGGCCG GCACCGTCGA GATCCAGGGC CAGCCGCTCG ATGGCCTCAA CGGGCGCGCG
GGCTATCTGT TTCAGGCCGA TGCGCTGATG CCGTGGAAGA CCTCGCGCGA CAACGTGGCC
ATCGCGCTGG AAATCTCGGG CACGCCGCGG CGCGAAGCGC TGGAGCGGGC CGAGAACTGG
CTGGAAAAGG TCGGCCTGAA GGGTTTCGGG CACCGCTATC CCCACATGCT TTCCGGCGGC
CAGCGCAAGC GCGTCGCCAT GGCGCAGGTG CTGATCCGCG ACCCGGAAAT CCTGCTGATG
GACGAGCCCT TCGGCCCGCT GGACGCGCAG ACCCGGCTGA TCATGGGGGA TCTGTTGCTG
GACCTGTGGC AGCAGGACCG CAAGGCGGTG ATGTTCGTGA CCCATGATCT GGAAGAGGCC
ATCGCGCTGG CGGACCGGGT GGTCATCATG TCGACGGGAC CGGACGCGAA GCTGATCGGG
GATTTCACGA TTCCCCTGGC GCGGCCGCGG GACGTTTCCG AGATCAAGCT GTCCCCCGAG
TTCCAGGAAC TGCACCGCGA CATCTGGCAC CTGCTGAAAG AGCAGGTGCT CAAGGCCTAT
GGCAACCAGA ACCGGGAGGA GCGGGCATGA
 
Protein sequence
MQHAVRLDNV DISFGATGKS VFRAVAGANL SVAKGEFVAI VGPTGSGKST LLNAAAGLLK 
PSAGTVEIQG QPLDGLNGRA GYLFQADALM PWKTSRDNVA IALEISGTPR REALERAENW
LEKVGLKGFG HRYPHMLSGG QRKRVAMAQV LIRDPEILLM DEPFGPLDAQ TRLIMGDLLL
DLWQQDRKAV MFVTHDLEEA IALADRVVIM STGPDAKLIG DFTIPLARPR DVSEIKLSPE
FQELHRDIWH LLKEQVLKAY GNQNREERA