| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4856 |
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| Symbol | |
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| ID | 4583417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 358921 |
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| End bp | 359907 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772159 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_918612 |
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| Protein GI | 119387578 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.416594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA TTTCCCGCCG CCAGCTTGTC GCCGGGGCTG CGGCCCTGCC TTTCGCGGCC
CCGCTGGTGG CCCGCGCGCA ATCGACCCAG TTGCGCCTTG GCCTGATCAC CCCGGTCGGC
CATTCGTGGA ACGACGCGGC GCTGCGCCTG GCCGAGCGCC TTGCCCAGCA AAGCGACGGC
CGCCTGACGA TGACCGTCTT CCACTCCGGC CAGCTGGGCA ACGAGCCTGC GATGATGCAG
CAGCTGCAAT CGGGGGCGCT GGACATGGGC ATCATCCAGG CCGCCGAACT GGGCTCTCGC
GTCGAGCATA TCGCGGCGAT CAATGCGCCC TATCTGGTGC GCTCGACCGA TGCCGTGGCC
AGGCTGGTCC GCCACCCGGA CGTGCTGAAG CTGTTCGACG TGCTGCCCCG GCAGACCGGC
ACCATCGGCC TTGGCTGGGC CATCACCGGC ATGCGCACGG TATTTTCGGT CAAGCCCATC
GACAGCATCG CCGGCCTGAA CGGCATGAAG CTGCGCATCA ACCCGACGCC GGTCTATCGC
GACTTCTACC AGCTGCTGGG CTCGGCGCCG ACGCCGATTC CGACGCCGCA GGTCTTCGAC
GCCATGTCGA ACGGTCAGGT CGACGGGCTG GAGGCCGATA TCGAGTTCTC GTGGAACCAG
CGCTTCGACA AGGTGGCAAA GTCCATCCTG CGCATGAACG CGGTGTTCAT GCCGGCGGCC
GCGGTCGCCT CGGGCCGGGT CTGGACGGCC ATGCCGGAGG CTGATCGCGA GCTGATCGCC
GCGGCGGTCA GGACCGTGCT GGACGAGCAG ATCGACAGCC TGGCGGGCGA GGAGCCGGCG
CTGATCGAGA ACCTCCGCCA GACCGGGGTG CCGATGCACG AGGTCCCCCA GGAGGACACG
ACCGAGATCA TCGCCGCCTT CGACAAGATC TGGATGCCGA AAGCGCCGGT GATCGAGCAG
TTGCGCGAAA TCGGCGCGGC GCTGTGA
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| Protein sequence | MIKISRRQLV AGAAALPFAA PLVARAQSTQ LRLGLITPVG HSWNDAALRL AERLAQQSDG
RLTMTVFHSG QLGNEPAMMQ QLQSGALDMG IIQAAELGSR VEHIAAINAP YLVRSTDAVA
RLVRHPDVLK LFDVLPRQTG TIGLGWAITG MRTVFSVKPI DSIAGLNGMK LRINPTPVYR
DFYQLLGSAP TPIPTPQVFD AMSNGQVDGL EADIEFSWNQ RFDKVAKSIL RMNAVFMPAA
AVASGRVWTA MPEADRELIA AAVRTVLDEQ IDSLAGEEPA LIENLRQTGV PMHEVPQEDT
TEIIAAFDKI WMPKAPVIEQ LREIGAAL
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