| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4763 |
|---|
| Symbol | |
|---|
| ID | 4583266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 259133 |
|---|
| End bp | 260473 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639772067 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_918520 |
|---|
| Protein GI | 119387486 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.849021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG CCCCCGCCGC CCCGCTCGTC CGCCTTGTCG ACGACGATCC CGACCTGCTC
GATGCGCAGA TGCAGGCGCT GCATCTGGCG GGCTTTCGCG GCGAAGCCTT CACCGACCCG
GCCGAGGCAT TGGCCGGCCT TGGCCCCGAC TGGCCCGGCG TTGTGCTGTC GGACGTGCGC
ATGCCGGGCA TGGACGGGTT CCAGCTGTTC GAGCGCATCC ATGCGCTGGA CCCCGACCTG
CCGGTGATCC TGCTGACCGG GCATGGGGAC GTGCCGATGG CGGTCGCGGC GCTGAAACAG
GGCGTCTACG ACTTCCTGGC CAAGCCGGTC GGCGGCGGGA CGCTGGCGGC GGCGCTGGCG
CGCGCGGCCT CCAGCCGGGC GCTGGTGCTG GAAAACCGCG CCCTGCGCCG CCAGCAACAG
GACAGCGCCG TGCGCGAGAC CCGGCTGATC GGGCAAAGCC CCTTCATGCA GCACCTGCGC
GAAACCGTCG CGCGGGTGGC CGAGGCGGGG GGCGACGTGC TGATCCTCGG CCCCGGCGGC
TCGGGCAAGG AAACCGTCGC CCGCGCCATT CACCGCCAGA GCCCGCGCCG CGCCCGCGCC
TTCGTCCATG TCGCCTGCGC CGCGCTGGAC GAGGCGCGCT TCGAGGCCGA GATGCTGGGC
ACCGAGCCGC AGGGCCGCAA CCCGCGCACG CCCGGCCGGC TGGAGGCCGC CCATCGCGGC
ACGCTGTATC TCGACGAGAT CGACGCCCTC GCCCCCGCGC TGCAAGCCCG CCTGCTGGCG
CTGATCGAGG CGCGCGAGAT CCAGCCGTCC GGCACCGCCG CGCCCCGGCC GCTGGACCTG
CGCATCATCG CCTCAAGCTG CGCCGATCTG GAACGGTTGA TGCGCGAGGG GGCATTTCGC
AGCGACCTTT ATTACCGGCT GTCGGGGGCC GTCCTGTCCC TGCCGCCGCT GGCCGAGCGG
CGCGAGGACA TTCCCGAACT GTTCCGGCAT TTCCTGCTGG CGGCGGCGTC GCGGCTGGAC
CTGCCGGTGG CGCCGGTCAC CGGGGCGGTC AAGGCGCGGC TGGCCGGTCA TGGCTGGCCC
GGCAACCTGC GCGAATTGCG GCAGTTCGCC GAAAGCCACG CGCTGGGGCT GACGCCCTTC
GATCCGCCGG CCGGGGGCGG CGATGCGCCG GGCCTTTCGG ATCTGGTCGC GGAATACGAG
GCCGAACTGA TCCGCGAGGC GCTTCGGCTG GCGCAGGGCA ATGCCACCCA GGCGATGGCC
CGGCTGCGCC TGCCGCGCAA GACCTTCTAC GACAAGCTGG CGCGGCACGG CATCAAGCCC
GCCGATTTCC GCCCCGGCTA A
|
|---|
| Protein sequence | MTAAPAAPLV RLVDDDPDLL DAQMQALHLA GFRGEAFTDP AEALAGLGPD WPGVVLSDVR
MPGMDGFQLF ERIHALDPDL PVILLTGHGD VPMAVAALKQ GVYDFLAKPV GGGTLAAALA
RAASSRALVL ENRALRRQQQ DSAVRETRLI GQSPFMQHLR ETVARVAEAG GDVLILGPGG
SGKETVARAI HRQSPRRARA FVHVACAALD EARFEAEMLG TEPQGRNPRT PGRLEAAHRG
TLYLDEIDAL APALQARLLA LIEAREIQPS GTAAPRPLDL RIIASSCADL ERLMREGAFR
SDLYYRLSGA VLSLPPLAER REDIPELFRH FLLAAASRLD LPVAPVTGAV KARLAGHGWP
GNLRELRQFA ESHALGLTPF DPPAGGGDAP GLSDLVAEYE AELIREALRL AQGNATQAMA
RLRLPRKTFY DKLARHGIKP ADFRPG
|
|---|
| |