| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4751 |
|---|
| Symbol | |
|---|
| ID | 4583254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 237770 |
|---|
| End bp | 239113 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639772055 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_918508 |
|---|
| Protein GI | 119387474 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.563662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGGC ATCAGGCCGT CCGCACCCCG GTCTTCAACG GCCCGGCCGG GTGGAGCGTC
ATCCTGCCTC CCGTCGCGCC CCGCGCGCGG CTGGAGGGGG CTACGGGCTG CGACATCGCC
ATCGTCGGCG GCGGCTTTGC CGGGCTCTCG GCCGCCCGCC GCCTGCACCA GATCGACCCC
GGGCTGGACG TGGTGATCCT GGACGCCGCG CGCATCGCCG AGGGCGGCAC GGGGCGCAAT
TCCGGCTTCA TGATCGACCT GCCGCATGAG CTGACCTCCA GTGATTACGC GGGGGGCGAC
AGCCACGACC GGCAACTGAC CGCGCTGAAC CGCCATGCCA TCGACTTTGC GGCGCAGGCG
GTCGCGGAAT ACGGTATCCC CGACGGCTGG TTCCAACGCA GCGGCAAGAT CAACGCCGCC
GCCTCGGCCG CCGGGATGGC CGCGAATGAA AGCTATGCCA AGCACCTGCA CGACCTGGGC
GAGGCGCATG AGATGCTGGA CGCGCAGGCC ATGCGCCAGA TCACCGGCAC CGACTATTAT
CGCGGCGGGC TCTACACGCC CGGCACGGCG ATGATCCAGC CGGCGGGCTA TGTTCAGGGC
TTCGCCGCCG GGCTGGAGCG CGGGGGCGTG CGCATCTACG AGAACTCGCC GGTCCTGACC
ATCGAGACCG CGGCGCAGGG CTGGCGGCTG GCGACCGCGC AGGGCGAGGT CCGGGCGCAG
CGGGTCATCA TGGCCAATAA CGGCCATCTG GAAAGCTTCG GCTTCAAGCG CGGCCGGCTG
ATGCATATCA TGCTGAACGC CTGCATGACC GAGGAGCTGT CGCCCGAGGC GCTGCGCGCG
CTTGGCGGGC AGGAATGCTG GGGCGCCACG CCCTCGGACC CGATGGGCAC GACGGTGCGC
CGGATCGGCC CGGCGCAGGG CGGCAATCGC ATCGTGATCC GTCAGGGCGG CTATTACCGG
CCCGGGATGC AGACCAGCGC AGGGGATCTG TCCCGGCTGG TCGGCCATAT GCGGCAGAAA
TTCGACGCGC GCTTCCCGAT GCTCAAGGGG CTGCGCTTCG AATATTGCTG GTCGGGGCAT
CTGTGCCTGT CGAAGAACGG CGTCTCGGTC ATGCGCGAGC TGGAGCCGGG CCTGTTCGCC
GCCTGCGTGG ACAACGGGCT GGGCACCACC CGCAGCACGC TGACCGGGAT CGGCGCGGCC
GAGATGCTGT GCGGGCAGTC GAGCACCATC ACCGGGTTCT TCACCGCCGA GGCCGAGCCT
TCGCGCCTGC CGCCCCATCC CTTCGACACC ATCGGCGCCA ATGCCTATCT GCGCTGGAAA
GAATGGCAAT CGCGGCTAGA ATGA
|
|---|
| Protein sequence | MARHQAVRTP VFNGPAGWSV ILPPVAPRAR LEGATGCDIA IVGGGFAGLS AARRLHQIDP
GLDVVILDAA RIAEGGTGRN SGFMIDLPHE LTSSDYAGGD SHDRQLTALN RHAIDFAAQA
VAEYGIPDGW FQRSGKINAA ASAAGMAANE SYAKHLHDLG EAHEMLDAQA MRQITGTDYY
RGGLYTPGTA MIQPAGYVQG FAAGLERGGV RIYENSPVLT IETAAQGWRL ATAQGEVRAQ
RVIMANNGHL ESFGFKRGRL MHIMLNACMT EELSPEALRA LGGQECWGAT PSDPMGTTVR
RIGPAQGGNR IVIRQGGYYR PGMQTSAGDL SRLVGHMRQK FDARFPMLKG LRFEYCWSGH
LCLSKNGVSV MRELEPGLFA ACVDNGLGTT RSTLTGIGAA EMLCGQSSTI TGFFTAEAEP
SRLPPHPFDT IGANAYLRWK EWQSRLE
|
|---|
| |