Gene Pden_4722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4722 
Symbol 
ID4583225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp209778 
End bp210263 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID639772026 
Productnitrate reductase cytochrome c-type subunit (NapB) 
Protein accessionYP_918479 
Protein GI119387445 
COG category[C] Energy production and conversion 
COG ID[COG3043] Nitrate reductase cytochrome c-type subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0507441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0973105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGTC AAGATCCTTT CCGTCTGATC CGGCCCGCCG CCATGGCCGG GCTGGTGCTG 
TTCGCCCTTG TCGGCGCCGC CCTGCCGCAA GCCGAGCCGG CAGTGCAGAT CGTGCCGCCG
CTGACCGGCT GGACCGAACC CATGTCCGAG GGGCAGATCC CGCCGCTCGG GCGGCCGATC
ACCGATGACG TGCGCCGGAT GCGCAACTAT CCCGAACAGC CGCCGGTGAT CCCGCATTCC
ATCGACGGCT ACCAGCTGAC GGTGAACACC AACCGCTGCA TGGATTGCCA CAAGCCGCAG
TTCACCGAGG GCTCGGGCGC GCCGATGATC AGCGTCACGC ATTTCCAGGA CCGCGACGGG
CAGATCCTGA CCGACGTGAC GCCGCGGCGC TATTTCTGCA CTGCCTGCCA TGTCCAGCAA
GCCGACGTGA AGCCGCTGGT GCCGAACGAG TTCCGCGACG GCTATCGCCA CGCCGGGGGC
CCGTGA
 
Protein sequence
MRGQDPFRLI RPAAMAGLVL FALVGAALPQ AEPAVQIVPP LTGWTEPMSE GQIPPLGRPI 
TDDVRRMRNY PEQPPVIPHS IDGYQLTVNT NRCMDCHKPQ FTEGSGAPMI SVTHFQDRDG
QILTDVTPRR YFCTACHVQQ ADVKPLVPNE FRDGYRHAGG P