Gene Pden_4671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4671 
Symbol 
ID4583174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp162586 
End bp164157 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content62% 
IMG OID639771975 
ProductAltronate dehydratase 
Protein accessionYP_918428 
Protein GI119387394 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCAA TAATCATTTT GGAATCCACC ATGAAAGCGG AAGCAATCTC TCCGGTGATC 
CTGCTCAACC CGACGGACAA TGTTGGCGTT GCGCGCAAGG CGATAGCCAA GGGCACGGAC
ATGACAACGG ATGGCGGGAT GGTGACTGCG CGGGCGGATG TTCCCAGCGG TCACAAGATT
GCCCTGCGCG CGGTTGCTCC GGGCGAGCCG GTGCTGAAAT ACGGGCAGGT CATCGGTGTC
GCGACAGTGG CCATCGCGCC GGGCGACCAT GTCCACCTGC ACAATCTGGC CATGCAGGAA
AGCCATGTGA CGCATCATTT CGCCCAGGAC GCACGCACCA CACCGCTGCT GCCCGAAGAC
CAGCGCCGCA GCTTCCAGGG CTATGTTCGC CCCGATGGAC AGGTCGGCAC CCGCAACTTC
ATCGGCATCG TCACCTCGGT GAACTGCTCA GCGACGGTGG CGCGCGCCAT CGCCGACCAT
TTCAACAGGG GCGGCGGGCT GGACGGCTAT GCCAATGTGG ACGGCGTCGT CGCCCTGACC
CACGGCACAG GCTGCGCCAT CAACATGCGG AGCGAGGGCT ATCTTTACCT TCAGCGCGTC
CTGGCGGGCT ATGCGCGCAA CCCGAATTTC GCCGGTATCC TGTTCATCGG CCTGGGTTGC
GAGACGAACC AGATCGACCC TATCGTGGCG AAATTCGGCC TTGAGGAAGG GCCGCATCTG
CGAACGATGA CGATCCAGAA TCTGGGCGGC ACACGCAAGA CGGTCGAGAT TGCCTGCGAT
ATCATCCGCG AGATGCTGCC CCAGGCGAAT GCCGTGCAGC GGAGCGCCCA GCCCTTGGCC
GGGCTGAAGG TCGCGCTGCA ATGCGGGGGG TCGGACGGCT ATTCCGGCAT TTCCGCCAAC
CCGGCGCTTG GCCATGCCGC CGACCTGATC GTGCAGCACG GCGGCACCGC CGTCCTCAGC
GAAACGCCCG AGATCTATGG CGCCGAACAC CTGCTGACCC GCCGCGCCGC CACCCCCGAG
GTGGCGCAGA AGCTGATGGA CCGCATCGCA TGGTGGCGCG AATACACGCA GCGCAACGGG
GCCGAATTGA ACAACAACCC TTCGCATGGA AACAAGTTGG GCGGCCTGAC CACGATTCTG
GAAAAGTCGC TCGGCGCGGT GGCCAAGGGT GGCTCGATGC CGCTGGAGGC GGTGTATGAA
TATGCCGAGA TCATCGACAA GACCGGCTTC GTCTTCATGG ATACGCCCGG TTACGATCCG
GTGGCGGTCA CCGGGCAGGT TGCGGGGGGC TGCAACGTGA TCGTCTTCAC GACCGGGCGC
GGCTCGGTCT CGGGTTTCAA GCCGGCGCCC TGCATCAAGG TTGCAACCAA CTCGCAAATG
TATGAACACA TGAGCGACGA CATGGATATA AACTGCGGCG ACATCGTTCA GGGCACCGAT
ACGATCGAAG CGGCGGGCAA GCGTATTTTC GAGAAGATCC TCGCGGTCGC CTCTGGTGAG
CATACACTGA GCGAGGATTA CGGGTTTGGG GACAATGAAT TCGTGCCATG GCAGATCGGA
GCCGTAACCT GA
 
Protein sequence
MHAIIILEST MKAEAISPVI LLNPTDNVGV ARKAIAKGTD MTTDGGMVTA RADVPSGHKI 
ALRAVAPGEP VLKYGQVIGV ATVAIAPGDH VHLHNLAMQE SHVTHHFAQD ARTTPLLPED
QRRSFQGYVR PDGQVGTRNF IGIVTSVNCS ATVARAIADH FNRGGGLDGY ANVDGVVALT
HGTGCAINMR SEGYLYLQRV LAGYARNPNF AGILFIGLGC ETNQIDPIVA KFGLEEGPHL
RTMTIQNLGG TRKTVEIACD IIREMLPQAN AVQRSAQPLA GLKVALQCGG SDGYSGISAN
PALGHAADLI VQHGGTAVLS ETPEIYGAEH LLTRRAATPE VAQKLMDRIA WWREYTQRNG
AELNNNPSHG NKLGGLTTIL EKSLGAVAKG GSMPLEAVYE YAEIIDKTGF VFMDTPGYDP
VAVTGQVAGG CNVIVFTTGR GSVSGFKPAP CIKVATNSQM YEHMSDDMDI NCGDIVQGTD
TIEAAGKRIF EKILAVASGE HTLSEDYGFG DNEFVPWQIG AVT