| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4657 |
|---|
| Symbol | |
|---|
| ID | 4583160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 147826 |
|---|
| End bp | 149097 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639771961 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_918414 |
|---|
| Protein GI | 119387380 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGG TGATGCTGGT CGAGGACGAT GCCGACCTGC GGCAGGCGAC TGCCGAGACG
CTGGAACTGG CCGGTTTCCG GGTCCATGCC TTCGACGCCG CCGCGCCCGC GCTGGACGTG
CTGCGGCCTG ATTTTCCGGG CGTGATCCTG TCGGACCTGC GGATGCCGGG GCTTTCGGGG
TTGGATTTTC TGGATCGCGC GCGCGGGGTC GCGCCGGATG TGCCCTTCGT CCTGATCACC
GCCCATGGCG ACGTGCCCGC CGCGATCCGC GCCATGCGGG GCGGGGCGCA TGACTTTCTG
GAAAAGCCCT GCGCGCCGGA ACTGATGCTG GATGTGCTGA AGCGGGCGCA GGCGATGCGC
GACCTGCATC TGGAAAACGC CCGCCTGCGC CAGATACGGA TCGAGGACCG CCTGATCGGG
CGATCCGCCG CCATGCAGGA CTTGCGCCAG AGGCTGCGCG CGCTGGCGGG CCTGCAACTC
GATCTGCTGA TCGCGGGCGA GACCGGCACC GGCAAGGAAC TGGTGGCCCG CATCCTGCAC
GACCTGTCCC CGCGTGGCGA GGGGCCTTTC GTCGCCATCA ACTGCGGCGC GCTGTCGGAG
CCCGAGGTGG ACCGGGAACT GTTCGGCACC AGCGATGCGC CCGGCCTGAT CGCGCGGGCC
GAAGGCGGGA CGCTTTATCT GGACGAGCTT GAATCCATGC CTGACGGGCT TCAGGTCCGC
CTGCTGCGCG TGGTCGAATC GCGCGAGATC ACCCCGCTTG GCGCAGCCCC CCGTCCGGTC
GATCTGCGTA TCCTCGGCAG CGTCAAGCGC CCGCCCGACG TCCTGACGGC GGAAGGGCGG
CTGCGCGCCG ACCTGTTTCA TCGCTTCAAC GCCACGCTGC CTCTGCCTTC TTTGCGCGAA
CGCGAGGATG ACGCTGCCTT GCTGGTCACC CATTTCGCTG CCGAGGCCGC CGCCCGCCAC
GATCTGCCGA AACCCCATAT CGACAGCGTC CTGCGCCGCC GGATCGCTTA TCACGACTGG
CCAGGCAATG TCCGCGAGGC CCGCAACCTG GCCGAGCGGC TGGTGATCGG GTTGGATACC
GACTTTCCGA CGCCGGGGCC CGGGGGCGAG ACGGCCGGCA TGGGCTATGA CGCCGCGATG
GAGGGCTTCG AGGCCCGCCT GCTGCGATCC GCGCTGATCC AGACCGGCGG GCGCAAGGCC
GAGGCCGCCG CACTTCTGGG CATCCCGCGC AAGCGGCTTT ACCTGCGGCT GCGCCATCTC
GACATGCTGT GA
|
|---|
| Protein sequence | MPEVMLVEDD ADLRQATAET LELAGFRVHA FDAAAPALDV LRPDFPGVIL SDLRMPGLSG
LDFLDRARGV APDVPFVLIT AHGDVPAAIR AMRGGAHDFL EKPCAPELML DVLKRAQAMR
DLHLENARLR QIRIEDRLIG RSAAMQDLRQ RLRALAGLQL DLLIAGETGT GKELVARILH
DLSPRGEGPF VAINCGALSE PEVDRELFGT SDAPGLIARA EGGTLYLDEL ESMPDGLQVR
LLRVVESREI TPLGAAPRPV DLRILGSVKR PPDVLTAEGR LRADLFHRFN ATLPLPSLRE
REDDAALLVT HFAAEAAARH DLPKPHIDSV LRRRIAYHDW PGNVREARNL AERLVIGLDT
DFPTPGPGGE TAGMGYDAAM EGFEARLLRS ALIQTGGRKA EAAALLGIPR KRLYLRLRHL
DML
|
|---|
| |