Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4656 |
Symbol | |
ID | 4583159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 145872 |
End bp | 147824 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639771960 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_918413 |
Protein GI | 119387379 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCC GCGGCTCGAT CCGGGGGCGG CTGATGGCGG CGCTGGTGCT GGTCGTGATC ATCGCGGCTG GGGTGCTGGC GGTCGGCATG GTGGTGATGC TGCGGGCCGA GCGCGACTTT CGCGCATTGG CGCAGGACCG CATCCCCGCC GTCGCGCTGG CGGGCGAACT GGCCGAGGCG ACGGGCGAAC TGGCCGCGCT GGCGATGCAG ATGGTCGCCG ACCCCGCCAT GCCTGCCGAG GGGACGCGCC GCGCCATCGA CAGCGCCTCG CAAGGGGTCG AGGGGGTGCT GGCTTCGCCC CTCTGGCTGG CAGCGCCCGA ACGCGCCGAG ACCCGCGCCG GGATCGAGGT GGCCGAGCGC GCCCTGCGCC GCGCGCTGAC GGGGTTCGGC AGGCTCAGCG CCGACCTGAC CCGGCGCGCG CGGCTTGATG CCCGGACCGG GGCCGACCTG CGCTGGATCC ACGCCGATGT GCAGGATCAG GTGCAGGGGA TCCTCAGCGA CCTGTCCTTC AACATGGATA CGCAACTGGC GGCGCTGGTC GTGAACACCG ACCCGGATGC GCGGGCCGGG GCTGAGCAGG CGCTGTCGCA GGACTGGCTG CTGCGCGACC GGGTGCAGCA GATCGGCTCC GAGGCAGCGA CGCTGACCGC GCTTCTGTTG CAGGCGCGCT CGGCCGACAG CCTGGACGCG CTGGAACAGA CCGGCATGCT TGGCCGCGAT ACGCTGGACC GGCTGGCGCT GGCGCAACTG AACCTGCCGC AGCGTGTCGA TGTGACGCTG CTGACGCAGG CACTGGATCG GCTGAAGGCG CTGGCCTCGG GGTCGGACAG CATCTTTGTC CAGCAACAGC AGCGGCTGGA GTTGCACCGC GCCGCCGTGT CCGAATTGCA GACCGCACAG GCCGCCCTGG CCAGGATGCA GGCGCTTTTG ACTGATCTGG GCCGGACCGA GCGGATCGGG GCGCAGCGCC GCGCCGATGC CGCCGCAACG GCGATCCTGC GCGGTTCGGT CTGGCTGGGG CTGGTGACGC TGCTGGGTGC GGCGGCGACG GCCATGATCC TGGCGGTCTT TGTCCACAAC CGCATCCTGC TGCGGATCGA GGCGCTTTCC ACCGACCTGA CCCGCATCGC AGGCAGCGAT TCCGGCATGC CCCGCCCCCA AGGCGACGAG ATCGCCGAGA TGGCCCGCGC GGTCGAGGTC TTCCGCGCCT CGGTCCAGGC CCGCCAGCAG GCGCTGGAAC GGCTGGAGAT GACGCAGCGC GAACTGGTGC AGGCGGGCAA GATGGCGGCG CTTGGCCAGA TGTCCGCCGC GATCAGCCAT GAGATCAACC AGCCGCTGGC CGCCATCGGC CACCGCCTGC ACAACCTTGG CGCGGCTCAT CCCGATGCCC GCCCGGCCAT CGCGCGGATC GAGGCGCTGC TGGAGCGCAT CACCCGCACC ATCGGCCATC TGCGCCGTAT CGCGCGCCGC TCGGCCCATC GCAATGCGCG GGTGATGCTG GCCGAGCCGG TGCAGGCCGC GCTGGACCTG CTGGACCACC GCCTGCGGGC CGAGGGCGTG CGCGTGGACT GTGCCGATCT GGCCGGGCTG GCGGTCGCAG GGGACGAGAT CCTGCTGGAG CAGGTGCTGC TGAACATCCT GGGCAATGCG CTGGATGCGA TCGGGGCGCG CGAGAATGCT TCCGAGCCGG GCTTGATCCG TATCGAGTTG CAGGCACGCG ACCCCGTCCT GCTGGTCGTT CGCGACAATG GCGTGGGCTT GGAGGGCCAG AGCGGGCAGA CGCTGACCGA TCCTTTCGTG ACCACCAAGG AGCCGGGCAA GGGGCTTGGC CTTGGCCTTT CCATCGCGTT CAACGTCATG CAGGACATGG GCGGGCATCT GGAAATCGAG CAGCACGCCG AAGGCGGCGC CGAGGTCCGG CTGCGCCTGA ACCGCTGGCA GGAGGAGGGA TGA
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Protein sequence | MIRRGSIRGR LMAALVLVVI IAAGVLAVGM VVMLRAERDF RALAQDRIPA VALAGELAEA TGELAALAMQ MVADPAMPAE GTRRAIDSAS QGVEGVLASP LWLAAPERAE TRAGIEVAER ALRRALTGFG RLSADLTRRA RLDARTGADL RWIHADVQDQ VQGILSDLSF NMDTQLAALV VNTDPDARAG AEQALSQDWL LRDRVQQIGS EAATLTALLL QARSADSLDA LEQTGMLGRD TLDRLALAQL NLPQRVDVTL LTQALDRLKA LASGSDSIFV QQQQRLELHR AAVSELQTAQ AALARMQALL TDLGRTERIG AQRRADAAAT AILRGSVWLG LVTLLGAAAT AMILAVFVHN RILLRIEALS TDLTRIAGSD SGMPRPQGDE IAEMARAVEV FRASVQARQQ ALERLEMTQR ELVQAGKMAA LGQMSAAISH EINQPLAAIG HRLHNLGAAH PDARPAIARI EALLERITRT IGHLRRIARR SAHRNARVML AEPVQAALDL LDHRLRAEGV RVDCADLAGL AVAGDEILLE QVLLNILGNA LDAIGARENA SEPGLIRIEL QARDPVLLVV RDNGVGLEGQ SGQTLTDPFV TTKEPGKGLG LGLSIAFNVM QDMGGHLEIE QHAEGGAEVR LRLNRWQEEG
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