Gene Pden_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4548 
Symbol 
ID4583287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp28450 
End bp29838 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content68% 
IMG OID639771854 
Productaldehyde dehydrogenase 
Protein accessionYP_918307 
Protein GI119387273 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.676442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA CCATCGCCCT GATATCGCCC GCCACCGGCA GGACCCTTGT CGAAAGGCAG 
ACCCTGGGCA TCGAGGACGC GCGCGCCGCC GTTGCCCGCG CCCGTGCCGC CCAGCCCGAA
TGGGCGGCGC TGCCGCTGGA CGAGCGGATC GCCCGCATCC GCGCCGGGAT CGAGGCGCTG
AACGCCATGA AGGATGCGAT AGTGCCCGAA CTGGCCGATC AGATGGGCCG CCCGATCCGT
TACGGCGGCG AATTCGGCGG CGTCAACGAA CGCGCCGGCC ATATGATGAA GATCGCGGCC
CAGGCTCTTG CCCCGACCGT GGTCGAAGAC AGCGATCATT TCGCGCGCGA GATCCGGCGC
GAGCCGGTGG GCGTGGTCTT TGTCATCGCG CCCTGGAACT ATCCCTTCCT GACCGCCGTC
AACACGGTCG TGCCCGCCCT GGTCGCCGGC AATGCCGTGA TCCTGAAACA TGCGAGCCAG
ACCCTGCTGG CGGGCGAGCG TCTGGCCGAG GCGCTGCATC GGGGCGGCGT TCCCGCCGAG
GTGATGCAGA ATGTCGTCCT GGACCACCAG ACGACCGAGG CGCTGATCGC CGGGCGCAGC
TTCGGCTTCG TGAACTTCAC GGGCTCGGTC GCCGGAGGGC GTGCGATCGA GCGGGCCGCC
GCGGGGACCT TTACCGCGAC CGGGCTGGAG CTGGGCGGCA AGGATCCCGG CTATGTCCGC
GCCGATGCCG ATCTGGATGC GGCGGTGGAT GGGCTGATGG ACGGCGCCAT GTTCAACAGC
GGCCAGTGCT GCTGCGGGAT CGAGCGGATC TATGTCCACG AAAGCCTCTT TGACGCCTTC
GTGGCCAAGG CCGTCGATTG GGTGAACGCG CAGAAGCTGG GCAATCCCCG CGACCCGGAT
ACGACGATGG GGCCGATGGC GCACCGGCGC TTTGCCGATC TGGTCCGCGC GCAGGTCTCC
GAGGCCGTGG CGCAGGGGGC AAGGCCGCTG ATCGACCCGG CGAACTTTCC CGCCGATGAT
GGCGGCGCCT ATCTTGCGCC GCAGGTGCTG GTCGACGTGA CCCACGACAT GCGCGTGATG
CGAGAGGAAA GCTTTGGCCC CGTCGTCGGC ATCATGCCGG TTCGCGACGA TGCCGAGGCG
ATCGGGCTGA TGAACGATTG CGACTATGGG CTGACCGCCT CGATCTGGAC CGCCGATGCC
GATGCCGCCG CCCGGATCGG CAGCCGGCTT GAAACCGGCA CCGTCTACAT GAACCGCTGC
GACTATCTGG ACCCGGCGCT GTGCTGGACC GGCTGCAAGG ACACCGGACG CGGCGCGGCG
TTGTCGGGCC TTGGCTATCT GGCCGTGACG CGGCCGAAAT CCTACCATCT GAAAAAGGTG
ACGAAATGA
 
Protein sequence
MSKTIALISP ATGRTLVERQ TLGIEDARAA VARARAAQPE WAALPLDERI ARIRAGIEAL 
NAMKDAIVPE LADQMGRPIR YGGEFGGVNE RAGHMMKIAA QALAPTVVED SDHFAREIRR
EPVGVVFVIA PWNYPFLTAV NTVVPALVAG NAVILKHASQ TLLAGERLAE ALHRGGVPAE
VMQNVVLDHQ TTEALIAGRS FGFVNFTGSV AGGRAIERAA AGTFTATGLE LGGKDPGYVR
ADADLDAAVD GLMDGAMFNS GQCCCGIERI YVHESLFDAF VAKAVDWVNA QKLGNPRDPD
TTMGPMAHRR FADLVRAQVS EAVAQGARPL IDPANFPADD GGAYLAPQVL VDVTHDMRVM
REESFGPVVG IMPVRDDAEA IGLMNDCDYG LTASIWTADA DAAARIGSRL ETGTVYMNRC
DYLDPALCWT GCKDTGRGAA LSGLGYLAVT RPKSYHLKKV TK