Gene Pden_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4516 
Symbol 
ID4583100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp536 
End bp931 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content65% 
IMG OID639771823 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_918276 
Protein GI119387242 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.128238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.845167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TGCAGCCATT CCTGATGTTC CAGGGCGGCC ATGCCGAACA GGCGATGGCG 
CTTTATGTCT CGCTCTTCGA CGATGGCGAG GTGCTGGATG TCACGCGCTG GCAAAAGGAC
GAGCCGGGGG CAGAGGGCAG CATCAAGCTG GCCCGCTTCA CCGCCGCCGG GCAGAGCGTT
CTGGCCAGCG ACAGCCCGGT CAAGCACGCC TTCGATTTCA CGCCCTCCTG GTCCTTCTTC
GTCGATTGCG CGTCCGGCGA GGAACAGGAA CGGCTCTTCG CCGCGCTTTC GGAGGGCGGC
GAGGTGTTGA TGCCGCCCGG CGACTACGGC TTCAGCAAGC GTTTCGCCTG GGTCGCCGAC
CGTTTCGGCG TGTCCTGGCA ACTCAATCTC GCATGA
 
Protein sequence
MTAMQPFLMF QGGHAEQAMA LYVSLFDDGE VLDVTRWQKD EPGAEGSIKL ARFTAAGQSV 
LASDSPVKHA FDFTPSWSFF VDCASGEEQE RLFAALSEGG EVLMPPGDYG FSKRFAWVAD
RFGVSWQLNL A