Gene Pden_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4481 
Symbol 
ID4583031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1695640 
End bp1696647 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content71% 
IMG OID639771788 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_918241 
Protein GI119387186 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.130817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA TGATCATCCG CAAGGACCGC CGCGCCGGGC GCCTGACCTT CAACCGCCCG 
CAGGCGCTGA ACGCGCTGAG CCACGAGATG GCGCTGGCCA TCGACGCGGC GCTGCAAGAG
TGGCGCGACG ATCCCGAGGT GGCGCTGGTC GTCATCGATG CCGAGGGCGA GCGCGCCTTC
TGCTCGGGCG GCGACATCGC CGCGGTCTAT CGCGCCGGGC TGGAAGGCGA CCACCGGGTC
GGCCGCGAGT TCTTTCGCGA CGAATACCGC ATGAACGCGC GGATCGCCGA ATATCCCAAG
CCCATCGTCG CCTTCATGCA GGGCTTCGTG ATGGGCGGCG GCGTCGGCGT CGGCGGCCAT
GCCAGCCACC GCATCGTCGG CGACAGCACC CAGATCGCCA TGCCCGAAAC CGGCATCGGC
CTGATCCCGG ACGTGGGCGG CAGCTGGCTT CTGGGCCATG CGCCCGGCCG CTGCGGCGAA
TACCTGGGCC TGACCGGCGC GCGGATCGGC GCCGGCGACG CGATCTTCAC CGGCTTTGCG
GACAGCTATA TCCCCGAGGC GGAATGGCCG GCGCTGATCG AGCGGCTGGC CGAGACCGGC
GACGTGGCGG CGCTCGCGCC CCACCCCCGC CCCGAGGCGC CGCTGGAGGG CCGCGACCTT
TCGGCCTTCG GCGGCCATAC CGTGGCCGAG ATCGTCGCCG CGCTGGAGGC GGCGGGCGAC
GAGGCGGCGC TGAAGCCGCT GCGCCGCAAC TCGCCCCTGT CGATGGCGGC TACGCTGGCG
CTGGTGCGTG CCGCGCGCGG CGATGCTAGC CTGCGCGACA GCCTGGCGCG AGAGCTGCGC
TTTACCGCCC GCGCCACGGC CGAGAGCGAT TTCCTGGAAG GCGTGCGGGC GCAGATCATC
GACAAGGATC GCAACCCGCA ATGGTCGGCC GATGCCAGCC CGGCGCATGT CGAGGCGATG
CTGGCACCGC TGGGCGAGGA CGAAATCGAA TGGGAGAACG GCAAATGA
 
Protein sequence
MAEMIIRKDR RAGRLTFNRP QALNALSHEM ALAIDAALQE WRDDPEVALV VIDAEGERAF 
CSGGDIAAVY RAGLEGDHRV GREFFRDEYR MNARIAEYPK PIVAFMQGFV MGGGVGVGGH
ASHRIVGDST QIAMPETGIG LIPDVGGSWL LGHAPGRCGE YLGLTGARIG AGDAIFTGFA
DSYIPEAEWP ALIERLAETG DVAALAPHPR PEAPLEGRDL SAFGGHTVAE IVAALEAAGD
EAALKPLRRN SPLSMAATLA LVRAARGDAS LRDSLARELR FTARATAESD FLEGVRAQII
DKDRNPQWSA DASPAHVEAM LAPLGEDEIE WENGK