Gene Pden_4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4412 
Symbol 
ID4582962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1612588 
End bp1613799 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID639771719 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_918172 
Protein GI119387117 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.620152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.546759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCATG ACGTGACGAC GAAATCGCAC AAGGGCAGCC CTTTCTCGTG GTCCGACCCG 
TTCCTGCTGG AGGATCAGCT GACCGAGGAA GAGCGGATGA TCCGCGACAG TGCCGCGGCC
TTCGCCGCCG ACCGGCTGGC GCCGCGCGTC GAGGCCGCCT ATCTGAACGA GGAGACCGAT
CCCGAGATAT TCCGCGAGAT GGGCGCCTCG GGCCTTCTGG GCGTCACCGT GGACGAGGCC
TATGGCGGCG TCGGCGCCTC TTACGTCGCC TATGGGCTGG TCGCGCGCGA GATCGAGCGC
ATCGATTCGG GCTATCGCTC GATGGCTTCG GTGCAAAGCT CGCTGGTGAT GTTTCCCATC
GAGGCCTATG GCAGCGAGGC GCAGAAGCAG AAATACCTGC CGAAACTGGC CTCGGGCGAG
TTCATCGGCT GCTTCGGCCT GACCGAGCCG GATGCGGGCT CCGACCCCGC CGGCATGCGC
ACCGTGGCCC GCAAGACCGG GGGCGGCTAT GTGTTGAACG GGTCCAAGAT GTGGATCTCG
AACGCGCCCA TCGCCGATGT CTTCGTGGTC TGGGCCAAGT CCGAGGCGCA TGGCGGCAAG
GTGCGCGGCT TCGTGCTGGA CAAGGGCACG CCCGGCCTTT CAGCGCCCAA GATCAAGGGC
AAGCTGAGCC TGCGCGCCTC GATCACCGGC GAGATCGTGA TGGAGAATGT CGAGGTCGGC
GAGGACGCGC TGCTCCCGAA CATCGAGGGC ATGGGCGGTC CCTTCGGCTG CCTGAACCGC
GCGCGCTACG GCATCAGCTG GGGCGCGATG GGCGCGGCCG AGGATTGCTG GTTCCGTGCC
CGGCAATACG GGCTGGATCG TCACCAGTTC AACCGCCCGT TGGCCGCGAC GCAGCTTTAC
CAGAAAAAGC TGGCCGACAT GCAGACCGAG ATCGCGCTGG GGCTGCAAGC CAGCCTGCGG
GTCGGGCGGC TGTTCGACGA GGGCAAGTTC GCGCCCGAGA TGATTTCCAT CGTCAAGCGC
AACAATTGCG GCAAGGCGCT GGAGATCGCG CGCCAGGCCC GCGACATGCA TGGCGGCAAC
GGCATCCAGA TCGGCTATCA CGTCATGCGG CACGCGCAGA ACCTGGAAAC GGTGAACACC
TATGAGGGCA CGCATGACGT GCATGCGCTG ATCCTTGGCA GGGCGCAGAC CGGCATCCAG
GCGTTTGCGT GA
 
Protein sequence
MRHDVTTKSH KGSPFSWSDP FLLEDQLTEE ERMIRDSAAA FAADRLAPRV EAAYLNEETD 
PEIFREMGAS GLLGVTVDEA YGGVGASYVA YGLVAREIER IDSGYRSMAS VQSSLVMFPI
EAYGSEAQKQ KYLPKLASGE FIGCFGLTEP DAGSDPAGMR TVARKTGGGY VLNGSKMWIS
NAPIADVFVV WAKSEAHGGK VRGFVLDKGT PGLSAPKIKG KLSLRASITG EIVMENVEVG
EDALLPNIEG MGGPFGCLNR ARYGISWGAM GAAEDCWFRA RQYGLDRHQF NRPLAATQLY
QKKLADMQTE IALGLQASLR VGRLFDEGKF APEMISIVKR NNCGKALEIA RQARDMHGGN
GIQIGYHVMR HAQNLETVNT YEGTHDVHAL ILGRAQTGIQ AFA