Gene Pden_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4397 
Symbol 
ID4582947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1592380 
End bp1593675 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content69% 
IMG OID639771704 
Producthypothetical protein 
Protein accessionYP_918157 
Protein GI119387102 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA ATTTCACGCC CCAGCAACTG GCCGACCCCG GCACGGCCCG CGCCAACGAG 
ATCCTGCGCA GCTGCGTCCA TTGCGGTTTC TGCACCGCGA CCTGCCCGAC CTACAAGGTG
CTGGGCGACG AGCTGGACAG CCCGCGCGGC CGCATCTACC TGATCAAGGA CATGCTGGAG
AACGGCAAGG TTCCCGACGC CAAGACCGTC GGCCATATCG ACCGCTGCCT CAGCTGCCTG
TCCTGCATGA CCACCTGTCC CTCGGGCGTG CATTACATGC ACCTGGTCGA TCACGCCCGC
GAATATATCG AAAAGACCTA TCGCCGTCCG CCGGGCGAAC GGGCGCTGCG CTGGCTTCTG
GCACGCATCC TGCCCTATCC GGGGCGCTTC CGGCTGGCGC TGATGGGCGC GAAACTGGCA
CGGCCCTTTC GGCGGCTGGT GCCGGATGCG CGGCTGCGGG CCATGCTGGA CATGGCGCCC
CGCGACATCC CGCCGCCCAG CCTGAACGAC CGCCCGCAGG TCTTTGCCGC CGAGGGGCCG
CGCCGCAAGC GGGTGGCGCT GCTGGTCGGC TGCGCGCAAA GGGCGCTGAA CACCGACATC
AACGACGCGA CCATCCGCCT GTTGCGCCGC CATGGCTGCG AGGTGGTGAT CCCGCGCGGC
CTGGGCTGCT GCGGCGCGCT GACCCATCAC ATGGGCAAGA CCGACGAAAG CCACGCCTCG
GCTGCCGCCA ATATCCGCGC GCTGATGGCC GAGGTCGCGG GCGAGGGGCT GGACGCGGTG
GTCATCAACA CCTCGGGCTG CGGCACCACG GTCAAGGATT ACGGACACAT GTTCGAAAAC
GATCCGCTGG CCGCCGATGC CGCGCGGGTG GCCGGCCTGG CCAAGGACAT CACCGAGGTG
ATGGCCGATC TGGGCCTGCG CGAGCCGGGC CATGCCGAGC CGCTGCGCGT CGGCTATCAC
GCCGCCTGTT CGTTGCAGCA TGGCCAGCAG ATCCGCGCGA CGCCCAAGGA GCTTCTGGCC
GCCGCCGGGT TCACCGTGCT GGAGCCGAAG GACGCGCATA TCTGCTGCGG CTCGGCCGGC
ACCTACAACC TGATGCAGCC GGCGATCTCG GCCGAATTGA AGCGCCGCAA GGTCGAGACG
CTGGAGGCGC TGACCCCGCA GGTCATCAGT GCCGGCAATA TCGGCTGCAT GATGCAGATC
GGCTCGGGCA CCGGCGTGCC GGTCGTCCAT ACGGCCGAAC TGCTGGACTG GGCCACCGGC
GGGCCAAGGC CGCGGGCGCT GGCGCATCCG GTCTAG
 
Protein sequence
MQTNFTPQQL ADPGTARANE ILRSCVHCGF CTATCPTYKV LGDELDSPRG RIYLIKDMLE 
NGKVPDAKTV GHIDRCLSCL SCMTTCPSGV HYMHLVDHAR EYIEKTYRRP PGERALRWLL
ARILPYPGRF RLALMGAKLA RPFRRLVPDA RLRAMLDMAP RDIPPPSLND RPQVFAAEGP
RRKRVALLVG CAQRALNTDI NDATIRLLRR HGCEVVIPRG LGCCGALTHH MGKTDESHAS
AAANIRALMA EVAGEGLDAV VINTSGCGTT VKDYGHMFEN DPLAADAARV AGLAKDITEV
MADLGLREPG HAEPLRVGYH AACSLQHGQQ IRATPKELLA AAGFTVLEPK DAHICCGSAG
TYNLMQPAIS AELKRRKVET LEALTPQVIS AGNIGCMMQI GSGTGVPVVH TAELLDWATG
GPRPRALAHP V