Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4367 |
Symbol | |
ID | 4582917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1558036 |
End bp | 1558938 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771674 |
Product | LysR family transcriptional regulator |
Protein accession | YP_918127 |
Protein GI | 119387072 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATGC GCCAGCTTCG CTGTTTCGTC GTCCTGGCCG AGGAGTTGAA CTTCACCCGT GCCGCGCGGC GGCTGAACAT GTCGCAGCCG CCGTTGAGCA CGCAGATCCA GACACTTGAG CGCGAAGTGG GTGCCGAACT CATCAGCCGC ACCAGCCGCA AGGTGGCGCT GACGCGGGCG GGCGAGCTGT TCCTGCCCCG GGCGCGCAAC ATGCTCGACC AGTATGAGCG CAGCCTGCAG GAGATCCGCG AAATCCAGCA GGGCCAGGAC GGATTGCTGG AAATCGGGGC AACCGGCTCG ATCCTGCGCG GGGGCCTGTC CGAGCTTTTG GCGCATTTCG CCCGGCTGCA TCCGCGAATC ACCCTGCGCG TGCACGAGCA GACCCCCGCC GCGCAGATCA CCGAGGTGCT GAGCCGGCGC ACCGATGTCA GCTTCAACCG CTCGGTGCCG CGCGACGAGG AACTGGCCCA CGAATACGGC TGGCGCGAGG AAATGGTGGC GCTGGTGCGC AGCGATCACC GGCTGGCCGG TCGCACCTGC GTTTCGATCG ACGACCTGCG CGAGGACCAG CATGTCGTTC TGCGCCCCGA CAGCTCCGAT TTCGCGGCCT ATGTCATGGC CTGCATCGTC GCCGCGGGCT ATCGGCCGCG GGTCTCGCAG CAGGTGGTGG ATGCGCAGTC GATCCCCAGC CTGATCGTGG CGGGCTTCGG GGTCAGCATC GTGCCGGCGG GCATCGCCAG GCTGACGGCG GGGCCGCTGA CCTTCCTGCC GATCCGGCCC AACCCGCCGG TCTCCGAGGT CTTTATCGTC TATCACCACC GCGACCCGGC GCCGGCGCTG CAACTGTTCC TGGCCGAGAT CCGCCGCAGC CTGGGCCATG ATCCCACGCG CCCCGCGCGC TGA
|
Protein sequence | MRMRQLRCFV VLAEELNFTR AARRLNMSQP PLSTQIQTLE REVGAELISR TSRKVALTRA GELFLPRARN MLDQYERSLQ EIREIQQGQD GLLEIGATGS ILRGGLSELL AHFARLHPRI TLRVHEQTPA AQITEVLSRR TDVSFNRSVP RDEELAHEYG WREEMVALVR SDHRLAGRTC VSIDDLREDQ HVVLRPDSSD FAAYVMACIV AAGYRPRVSQ QVVDAQSIPS LIVAGFGVSI VPAGIARLTA GPLTFLPIRP NPPVSEVFIV YHHRDPAPAL QLFLAEIRRS LGHDPTRPAR
|
| |