| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4346 |
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| Symbol | |
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| ID | 4582896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1529573 |
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| End bp | 1531753 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639771653 |
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| Product | ABC transporter related |
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| Protein accession | YP_918106 |
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| Protein GI | 119387051 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.345165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.461929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATG AGCTGCTGTC CCGCCTGTCG TCGCGCATCA CCAGCCGCAC CCCGGTGATC
CTGCAGGGCG AGGCGGCGGA ATGCGGCCTT GCCTGCATGG CGATGATCGC CGGCCATCAC
GGCCACCGGC TGGACCTGCC GGCGATCCGC CGCCGCATCG CGCTGGCGAT GTGCGGCGCG
ACGCTGAAGG ACCTGGTGCA GCTGGGCGGC CGGCTGGGGC TGGCGACGCG GGCGCTGCGG
CTGGGCATGG ACGACCTGCG CCGGCTGCGC CTGCCCTGCA TCCTGCATTG GAACCACCGG
CATTTCGTGG TGCTGACCCG GGTGACGGGG CGCCACGCCC ATATCCACGA CCCCGCCATC
GGCCAGCGCC GGCTGCCGCT GGACGAGGTC TCGGCCGCCT TCACCGGCAT CGCACTGGAG
GCCTGGCCGA CGGGCGAGTT CCGGCGCTGC GACGAACGCG CCCGCATCCG CCTGACCGAC
CTGGTGCTGC GCACCGCCGG CATCGGCCGG GCGGCGGTGC GGGTGCTGGC GATCTCGGCG
CTGATCGAAA TGGTGACCAT CGCGCTGCCC ATCGGCTTCC AGCTGGTGCT GGACGAGGTG
ATCGTGGCGG CCGACCGCGA CCTCTTGACG CTGATCGCCA TCGCGCTTGC CATGCTGCTG
GCCTTGCAGG TCGGCGCCAA CCTGGCGCGG ACATGGATCG CCATGCTGGT CGGCTCCAGC
CTGATCCTGC AATGGCGGGT GGCGCTGTTC GACCGGCTGA TGCGCCTGCC GCTGGGCTTT
TTCGAGAAGC GCCATGTCGG CGACATCGTC TCGCGGTTCT CCTCGGTGGA CAGCGTGCAG
CAGGTGCTGA CCACCAACGC CATCCAGTCG CTGCTGGACG GGGTCATGTC GGTGCTGCTG
GTGGCGATGA TGTGGCTTTA CGGCGGCTGG CTGGCCGCCG TCGCGCTGGC CGGCACGCTG
GCCTATGCGC TGTTCCGGCT GGCCTCGTAT CGCGCCTTCC GCCGCATGTG CGAGGAGGGG
ATCATCCACG CGGCCCAGGA AAGCACGCAT TTCATGGAAT CCGTGCGCGG CATCGCCAGC
GTCAAGGTGC TGGGCCTGGA ACCGCGCCGC CGCGGCACCT GGATCAATCA TCTGGTCGAG
CGCATCAACG CCGAATTGCG CGTGCAGCGG CTGGAGACCT GGTATCAGGC CACCGGGGGG
TTGCTGTTCG GGCTGGACCG GGTGCTGATC ATCTGGCTGG GTGTGCGGGC GGTGATCGAG
GGCGGGCTGT CGGTCGGCAT GTTCGTGGCC TTCCTGGCCT ACAAGGACCA GTTCGCCACC
CGCATCGTCG CGCTGATCGA CACCGGGCTG CAATTCCGCA TGCTGTCGCT GCATGGCGAG
CGGATCTCGG ACATCGCGCT GACCGAGCCG GAAGAGCCGG ACGAAAAGCA CGCCCTGCCC
ACGCCCCCCA TCGCAGGTGG CGGCGCGGCG GCGCTGGAGG TGCGCGGCCT CGGCTATCGC
TATGCCGAGA CCGAGCCGAT GCTGCTGCGC GAGCTGAACC TGACGGTGGC GCCGGGGGAA
TGCCTGGGCA TCGCCGGACC CTCGGGCGTG GGCAAGACGA CGCTGCTGAA ACTGCTCTCG
GGGCTGGCCG CGCCCTTGCA GGGGCAGATC CTGATCGACG GCGTGCCGGT GGGCAGCATG
GGGCTGGCAG CCTATCGCGC CCGCATCGGC TGCGTGCTGC AGGACGACCG GCTGTTCGCC
GGCTCGATCC GCGACAACAT CGCCGCCTTC GACAGCGCCG TGCCGCAGGA CTGGCTGCAC
GAATGCGCCC GGATGGCGGC GATCCACGAC GACATCATGG CGCTGCCCAT GGGCTATGAG
ACGCTGGTCG GGGACATGGG CAGCACGCTG TCGGGCGGGC AGAAGCAGCG GGTGGTGCTG
GCGCGCGCGC TGTGCCGGCG GCCGGCGGTG CTGTTCCTGG ACGAGGCGAC CAGCCATCTC
GACAGCGCCA ACGAACAGGC GATCAATGCC GCGGTCCGGC GCCTGCCGAT GACGCGGATC
ATCGTGGCGC ATCGCGACAC GACGCTGGCG ACGGCCGACC GGGTGCTGCG GCTGGACGGC
TCGGGCGGGC TGGTCGCGGT GCCGCACGGC CCGCGCCTGC CGCTGCGCAG CGCCGATGCG
CCGGTTTCGG CCGAAGGCTG A
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| Protein sequence | MNHELLSRLS SRITSRTPVI LQGEAAECGL ACMAMIAGHH GHRLDLPAIR RRIALAMCGA
TLKDLVQLGG RLGLATRALR LGMDDLRRLR LPCILHWNHR HFVVLTRVTG RHAHIHDPAI
GQRRLPLDEV SAAFTGIALE AWPTGEFRRC DERARIRLTD LVLRTAGIGR AAVRVLAISA
LIEMVTIALP IGFQLVLDEV IVAADRDLLT LIAIALAMLL ALQVGANLAR TWIAMLVGSS
LILQWRVALF DRLMRLPLGF FEKRHVGDIV SRFSSVDSVQ QVLTTNAIQS LLDGVMSVLL
VAMMWLYGGW LAAVALAGTL AYALFRLASY RAFRRMCEEG IIHAAQESTH FMESVRGIAS
VKVLGLEPRR RGTWINHLVE RINAELRVQR LETWYQATGG LLFGLDRVLI IWLGVRAVIE
GGLSVGMFVA FLAYKDQFAT RIVALIDTGL QFRMLSLHGE RISDIALTEP EEPDEKHALP
TPPIAGGGAA ALEVRGLGYR YAETEPMLLR ELNLTVAPGE CLGIAGPSGV GKTTLLKLLS
GLAAPLQGQI LIDGVPVGSM GLAAYRARIG CVLQDDRLFA GSIRDNIAAF DSAVPQDWLH
ECARMAAIHD DIMALPMGYE TLVGDMGSTL SGGQKQRVVL ARALCRRPAV LFLDEATSHL
DSANEQAINA AVRRLPMTRI IVAHRDTTLA TADRVLRLDG SGGLVAVPHG PRLPLRSADA
PVSAEG
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