| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4286 |
|---|
| Symbol | |
|---|
| ID | 4582836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1461247 |
|---|
| End bp | 1462191 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771593 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_918046 |
|---|
| Protein GI | 119386991 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.255291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.82352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTACA CCCTGAAACA CCTGCGCTAT ATCGAGGCGG CCGAGCGCCA CCAGTCGATC
ACCGCTGCGG CCGAGGCGCT GGCGGTTTCG CCCTCGTCCA TCGCCGCGGC CATCGACCAT
ATCGAGGCGC AGCTGGGCCA GCCGGTCTTT GCGCGCGTCC CCTCGCGCGG GATCGCGGCG
ACCAGTTTCG GGCGCAGGAT CATCGACGAA ATCCGGTTGC TGCTGGTGGC GCAGGCGCGT
TTCGACGGCA AGATCGCCGA TCTGGAGCAA CGCATCGACG GCACCGCCCG GATCGCCTGC
TTCACGCCGC TGGCGCCGAT CCTGCTGCCG ACCATCCTGT CCGAGGTGCG CGAGCGCTAT
CCGAACCTGA TGATCGAGGT GATGGAGGGC AACTGGGAAG AGGTCGTCCG CGCCGTGGAC
AGCGGCAATG CCGATTTCGC CTTTTGCTAC GGGCTGGTCA ACGAACTGGC CTATCGCTTC
CTGCCGCTTT TCGTCGGCCA TCCCCATGCT GCGCTGCCGG CGACGCATCC GCTGGCCAGC
GGGCGATTCG TCACGCTGGA ACAGCTTGCC CCCGAGCCGC TGGTGGTGCT GGACCTGGAC
CTGTCGCGGC GCTACCTGAT GGACCTGTTC GCGACGCGCG GGCTCAAGCC GAACGTGGTC
TATTCGGCGC GCTCGACCGA CATGATGCGG GCGCTGATCG CGGCCGGCAT GTGCTACGGC
ATCTTCAACA TCCGCCCGAT GAGCAAGCAG ACCTATGCCC GCGGCGACCT GGTGCGGCTG
CCGCTGGCCG GCGAACATGA CGCGCCGCGC GCCGGGGTGC TGACCCGGCG CGACGTGCAG
CTGACGCCGG TTTGCGAAGC GATCATCGCC ACTTGCGAGA TGCAGGCGAT GCGTGGCGAA
TTCGACCGCG CCTTCGTGCG GCCCTATCTT CCACAGGATT TCTGA
|
|---|
| Protein sequence | MHYTLKHLRY IEAAERHQSI TAAAEALAVS PSSIAAAIDH IEAQLGQPVF ARVPSRGIAA
TSFGRRIIDE IRLLLVAQAR FDGKIADLEQ RIDGTARIAC FTPLAPILLP TILSEVRERY
PNLMIEVMEG NWEEVVRAVD SGNADFAFCY GLVNELAYRF LPLFVGHPHA ALPATHPLAS
GRFVTLEQLA PEPLVVLDLD LSRRYLMDLF ATRGLKPNVV YSARSTDMMR ALIAAGMCYG
IFNIRPMSKQ TYARGDLVRL PLAGEHDAPR AGVLTRRDVQ LTPVCEAIIA TCEMQAMRGE
FDRAFVRPYL PQDF
|
|---|
| |