| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4278 |
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| Symbol | |
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| ID | 4582828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1451564 |
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| End bp | 1453204 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771585 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_918038 |
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| Protein GI | 119386983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.942105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATG AAGCAAACGT GCCGGATTAC ATCGTCGTCG GGGCTGGTTC GGCGGGTTGC
GTCGTCGCCA ACCGGCTTTC GGCCGATCCG GCCGTGCGGG TCACACTGCT CGAGGCAGGC
AATCGCGACA GCAGCCCCTG GATCCACATC CCGGTCGGCT ATTTCCAGAC CATGCACAAC
CCCCGCTTCG ACTGGTGCTA CGAGACCGAG CCCGATCCGG GGCTGGCCGG CCGTTCGCTG
CACTGGCCGC GCGGCAAGGT GCTGGGCGGC TCGTCCTCGC TGAACGGGCT GCTCTACGTC
CGCGGCCAGC GCGAGGATTA CGACCGCTGG GCGCAGATGG GCAACGACGG CTGGTCCTGG
CGCGAGGTCG GCCCGCTGTT CGAGGAGTTG GAAACCTTCC AGCGCGGCGA GGGCGAGGGG
CGCGGCATGC ATGGCGCCCT GCAGGTCTCG GACCCGCGCC TGCGCCGCCG CATCTGCGAA
TTGTGGATCG AGGCCGCCAA GGCCAACGGC ATCCCCTATA ACCCCGATTA CAACGGCCCG
GTGCAGGACG GCGTCGGCCA TTTCCAGTTG ACGGTGGACA AGGGGCGGCG CTGCTCGGCG
GCGGTGGCCT TCCTGCGTCC GATCCGCCAC CGGCAGAACC TGCAGGTCGT CACCCGTTCG
CTTGTCCGCC GCATCGTGAT CGAGCAGGGC CGCGCCACCG GGGTCGAGAT CCAGCGCCCC
GACGGCAGCC GGGAGGTGAT CCGCGCCGCG CGCGAAGTGA TCCTGTGCGC CGGCGCCATC
GGCTCGCCGC AGATCCTGAT GCTCTCGGGG GTGGGCGACG CGGATCACCT GCGCGACCTG
GGCATCGCCG TGCAGCACCA TTCCCCCGAG GTGGGCCGCA ACCTGCAGGA CCACCTGCAG
GCGCGGCTGG TGTTCAAATG CCGCGAGGCG ACGCTGAACG ACGAGGTGCG CAGCCTCGTC
AACAAGGCCA GGATCGGGCT GGAATATGCG CTCTTCCGCA CCGGACCGAT GACCATGGCG
GCCAGCCTGG TCTTCGGCTT CCTGCGCACC CGGCCGGGGC TCGCGACGCC CGACATCCAG
TTCCACATCC AGCCCTGGTC CGCCGACAGC CCGGGCGAGG GCGTGCATCC GTTTTCGGCC
TTCACGCAAT CGGTCTGCCA GTTGCGGCCG GAAAGCCGCG GCACGATCAC GCTGCGCTCG
GCCGATCCCT CGGCCGTGCC GGTGATCGCG CCGAACTACC TCGCGACGCA GACCGATTGC
GACACCCTGG TCGCGGGGAT CGAGATCGCC CGCAAGCTCG CCCGCACCGA GCCGCTGAAA
TCCGCCATTT CCGAGGAATT CCGCCCGACC GCCGACGTGC AGGGCCATGA CGAGATCCTG
GACTGGGCGC GGATGAACTC GACCACGATC TACCATCCGA CCGGCACCTG CCGCATGGGC
GCGGATGCGC GCGCCGTGGT CGATCCGCGC CTGCGGGTGC GGGGCATTCG CGGCCTGCGG
GTGGCCGATT GCTCGATCAT GCCCGAGATC GTCTCGGGCA ACACCAATGC CCCGGCCATG
ATGATCGGCG CCAAGCTGGC GCGCCTGGTC CTCGAGGACC GCCGCACCGA AGGCGGCGCC
GACACCACCA AAGCCGCTTG A
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| Protein sequence | MSHEANVPDY IVVGAGSAGC VVANRLSADP AVRVTLLEAG NRDSSPWIHI PVGYFQTMHN
PRFDWCYETE PDPGLAGRSL HWPRGKVLGG SSSLNGLLYV RGQREDYDRW AQMGNDGWSW
REVGPLFEEL ETFQRGEGEG RGMHGALQVS DPRLRRRICE LWIEAAKANG IPYNPDYNGP
VQDGVGHFQL TVDKGRRCSA AVAFLRPIRH RQNLQVVTRS LVRRIVIEQG RATGVEIQRP
DGSREVIRAA REVILCAGAI GSPQILMLSG VGDADHLRDL GIAVQHHSPE VGRNLQDHLQ
ARLVFKCREA TLNDEVRSLV NKARIGLEYA LFRTGPMTMA ASLVFGFLRT RPGLATPDIQ
FHIQPWSADS PGEGVHPFSA FTQSVCQLRP ESRGTITLRS ADPSAVPVIA PNYLATQTDC
DTLVAGIEIA RKLARTEPLK SAISEEFRPT ADVQGHDEIL DWARMNSTTI YHPTGTCRMG
ADARAVVDPR LRVRGIRGLR VADCSIMPEI VSGNTNAPAM MIGAKLARLV LEDRRTEGGA
DTTKAA
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