Gene Pden_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4227 
Symbol 
ID4582777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1389319 
End bp1389852 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content72% 
IMG OID639771534 
Producthypothetical protein 
Protein accessionYP_917987 
Protein GI119386932 
COG category[I] Lipid transport and metabolism 
COG ID[COG3154] Putative lipid carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC GCCCCACCCT GCCGCCGCTT CTGATGCGGC TTCCGCCCCC GCCGCTTGCC 
CGCCCGGCCC TTGGCCTGGC GCTGACGGCG TTCCTGCGCC GGATCGCCGC GAAAAAGCCG
GCGATCCTGT CGCGGCTCGG CCCCTACGCC CAGGCACGAT TCCTGCTTGA TGTCAGCGAC
GCGCCGTTCC TGCTGTTGAT GCAGCCCGAG GCGCGGCGGC TGACCGCCCA TGCGCGCCAT
GCGCCCGAGC CCGGGCATGA CGCCGCGATC CGCGGCGGGC TGGCGGCATT CCTGGCCATG
CTGCACGGCG CCGAGGATGG CGATGCGCTG TTCTTTTCCG GCGAATTGCA GATCGGGGGC
GACACCTCGG CGGTGCTGGC GCTGCGCAAT GCGCTGGACG ACGCCGAACT GGACCTGACC
GAGGAACTGG CGGGGCTGTC CGGCCGGCCG CTGGACCGCT GGCTGCGCCG CGGCTCGGCA
TTGGTGGCGC GCAAGAGCGG CCTGATTCTG TCCCGACAAG AGGTGATGCC ATGA
 
Protein sequence
MTQRPTLPPL LMRLPPPPLA RPALGLALTA FLRRIAAKKP AILSRLGPYA QARFLLDVSD 
APFLLLMQPE ARRLTAHARH APEPGHDAAI RGGLAAFLAM LHGAEDGDAL FFSGELQIGG
DTSAVLALRN ALDDAELDLT EELAGLSGRP LDRWLRRGSA LVARKSGLIL SRQEVMP