Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4139 |
Symbol | |
ID | 4582689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1296172 |
End bp | 1296666 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639771446 |
Product | ferric uptake regulator family protein |
Protein accession | YP_917899 |
Protein GI | 119386844 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0983423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTT CGGAATCCCC GCCTGACCCG TTTCACGAGC ACGACCACGC CCATTGCGCG GCCGCGGTGC TGCGCCGTGC CGAAGAGCAG GCAAGGACCG AAGGCGTGCG CCTGACCCCG GTGCGCCGCC GCGCGCTGGA GATCCTGCTG GAATCGCATC GCGCCATGGG CGCCTATGAG GTGCTGGAGC GGCTTTCGGC CGAAGGCTTC GGCAAGCAGC CCCCGGTGGC CTATCGGGCG CTGGATTTCC TGGTGGAGCA GGGGCTCGCG CATCGCGTGC AACGCCTGAA CGCCTATGCC GCCTGCCTTT CGGCCAAGCG CGACCATTCG CCGGCCTTCC TGATCTGCCG CGGCTGCGAG CAGGTGGCCG AGGCCGAGGC GCCCGAGTTG CGCGCGGCGC TGGACGGGCT GGCCGGGGCG ACGGGCTTCC GCATCGAGCG TAGCACCGTC GAACTGCTGG GCCTCTGCGC GCGCTGCACC GAGGCCGGCC TGTGA
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Protein sequence | MPTSESPPDP FHEHDHAHCA AAVLRRAEEQ ARTEGVRLTP VRRRALEILL ESHRAMGAYE VLERLSAEGF GKQPPVAYRA LDFLVEQGLA HRVQRLNAYA ACLSAKRDHS PAFLICRGCE QVAEAEAPEL RAALDGLAGA TGFRIERSTV ELLGLCARCT EAGL
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