Gene Pden_4137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4137 
Symbol 
ID4582687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1294622 
End bp1295404 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID639771444 
ProductABC-3 protein 
Protein accessionYP_917897 
Protein GI119386842 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.198915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG ATTTCCTGAC CCGAGCCGCC CTGGCGGGCC TTGGCCTTGT GCTGGCGACG 
GGGGCGCTGG GTTCCTTCGT GGTCTGGCGG CGCATGGCCT ATTTCGGCGA TTCGACCGCC
CATGCGGCGA TTCTGGGCGT GGCGCTGAGC TTTGTCTTCT CGCTGCCGAT CTATCTGGGC
ACGCTGGCGG TGGCCGTCGC CATGGCGCTG ATCGTCGCGC AGCTTACGGC GCGGGGCCAG
TCGATGGACA CGGTGCTGGG CGTGCTGGCC CATAGCGCGC TGGCGCTGGG GCTGGTGGGC
GTCAGCTTCG TGCCTTCGCT GCGGGTGGGG CTGGAGGCCT TTCTGTTCGG CGACATCCTT
GCGGTGACGC GGGCCGACCT TGCCTGGATC TGGGCCGGTG CGACGGCGGT GCTGGGGCTG
CTTATCTGGC GCTGGCAGCG GCTGGTGACG GCCTCGGTGA ACGAGGAACT GGCCATGGCG
GCGGGAATCG ATCCGGCGCG CGAGCGGCTG ATCCTGTCCC TGGCGCTGGC TGTGGTCGTG
GCTATCGCGA TTCGCATCGT CGGGGCGCTG CTGATTTCGG CCATGCTGAT CGTGCCGGCC
GCGGCGGCGC GGGGATTCTC TGCAACGCCC GAGCAGATGG CAGGTTCCGC CACCCTGATC
GGTGCCATTT CGGTTCTCGG CGGGCTTTGG GCCAGCCTGT GGCTGGACAC GCCGGCAGGC
CCTTCGATCG TGGCGATTTC TGCAGCGATT TATGCCGTGA CATTAGTGGT TTGCAGGAAA
TAA
 
Protein sequence
MLDDFLTRAA LAGLGLVLAT GALGSFVVWR RMAYFGDSTA HAAILGVALS FVFSLPIYLG 
TLAVAVAMAL IVAQLTARGQ SMDTVLGVLA HSALALGLVG VSFVPSLRVG LEAFLFGDIL
AVTRADLAWI WAGATAVLGL LIWRWQRLVT ASVNEELAMA AGIDPARERL ILSLALAVVV
AIAIRIVGAL LISAMLIVPA AAARGFSATP EQMAGSATLI GAISVLGGLW ASLWLDTPAG
PSIVAISAAI YAVTLVVCRK