Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4135 |
Symbol | |
ID | 4582685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1293363 |
End bp | 1294031 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639771442 |
Product | hypothetical protein |
Protein accession | YP_917895 |
Protein GI | 119386840 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.182102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACGA CCCGCATCCA CCGGGCGGTG CTGCCGGTGC TGCTGATCGC GGGCCTTGCT GCCTGCGGCA ACGACGACAC CGGCAGGGAG GCAAACCCCC TGCTGATCGC CGCCAGGACC GCCGGCAGCG CCGTGAGCGG GATGCGCGGC GGCGAGGCCG AACAGGCCCC CGCCGCCCCA CGCACGCCCG AGCAGATGGC CGCCGAGGCG CTGCGGGTCA ATCCCGCACC GCTGGTCATG GTCAACTTCG AATCGCTGGG CCGGACGCAG GTCATGGCGA TGACCGGGCA GAACGGCGCG ATGCGCACCT ATATGGCGCC TTCGAAAGAG GCCCTGATCC TGCGCGACGG CATGCTGATC GGCACGCGGG GCCTGGGCAA CGACCTCTCG GTCGTCGAGC CGCAGACCGA GGCGCTGATC CGCGCCGGCC GTTCGGGCTC GGCCCAACGC GTCATGCGCT ATTACAGCGG CGACGGGCTG GAACGGCCGC TGAGCTTCGA CTGCACCGTC GGCCCGGGCC CGAAGCCCGG CGTGATCGTG GAAAGCTGCG AGGGCCACGG GGCGCGTTTC CAGAACAACT TCATGCCGCA GGGCGGGCAT CTGCCGGTCT CGCGGCAATG GGCCGGGCCG CGGCTGGGTT ATATCACCAT CCAGACGCTG CGACCCTGA
|
Protein sequence | MITTRIHRAV LPVLLIAGLA ACGNDDTGRE ANPLLIAART AGSAVSGMRG GEAEQAPAAP RTPEQMAAEA LRVNPAPLVM VNFESLGRTQ VMAMTGQNGA MRTYMAPSKE ALILRDGMLI GTRGLGNDLS VVEPQTEALI RAGRSGSAQR VMRYYSGDGL ERPLSFDCTV GPGPKPGVIV ESCEGHGARF QNNFMPQGGH LPVSRQWAGP RLGYITIQTL RP
|
| |