Gene Pden_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4135 
Symbol 
ID4582685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1293363 
End bp1294031 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content71% 
IMG OID639771442 
Producthypothetical protein 
Protein accessionYP_917895 
Protein GI119386840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.182102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGA CCCGCATCCA CCGGGCGGTG CTGCCGGTGC TGCTGATCGC GGGCCTTGCT 
GCCTGCGGCA ACGACGACAC CGGCAGGGAG GCAAACCCCC TGCTGATCGC CGCCAGGACC
GCCGGCAGCG CCGTGAGCGG GATGCGCGGC GGCGAGGCCG AACAGGCCCC CGCCGCCCCA
CGCACGCCCG AGCAGATGGC CGCCGAGGCG CTGCGGGTCA ATCCCGCACC GCTGGTCATG
GTCAACTTCG AATCGCTGGG CCGGACGCAG GTCATGGCGA TGACCGGGCA GAACGGCGCG
ATGCGCACCT ATATGGCGCC TTCGAAAGAG GCCCTGATCC TGCGCGACGG CATGCTGATC
GGCACGCGGG GCCTGGGCAA CGACCTCTCG GTCGTCGAGC CGCAGACCGA GGCGCTGATC
CGCGCCGGCC GTTCGGGCTC GGCCCAACGC GTCATGCGCT ATTACAGCGG CGACGGGCTG
GAACGGCCGC TGAGCTTCGA CTGCACCGTC GGCCCGGGCC CGAAGCCCGG CGTGATCGTG
GAAAGCTGCG AGGGCCACGG GGCGCGTTTC CAGAACAACT TCATGCCGCA GGGCGGGCAT
CTGCCGGTCT CGCGGCAATG GGCCGGGCCG CGGCTGGGTT ATATCACCAT CCAGACGCTG
CGACCCTGA
 
Protein sequence
MITTRIHRAV LPVLLIAGLA ACGNDDTGRE ANPLLIAART AGSAVSGMRG GEAEQAPAAP 
RTPEQMAAEA LRVNPAPLVM VNFESLGRTQ VMAMTGQNGA MRTYMAPSKE ALILRDGMLI
GTRGLGNDLS VVEPQTEALI RAGRSGSAQR VMRYYSGDGL ERPLSFDCTV GPGPKPGVIV
ESCEGHGARF QNNFMPQGGH LPVSRQWAGP RLGYITIQTL RP