| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4096 |
|---|
| Symbol | |
|---|
| ID | 4582647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1251970 |
|---|
| End bp | 1252524 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639771405 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_917858 |
|---|
| Protein GI | 119386803 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCC TTCTGGTCGA GGACGATCCG ACCACGGCGC GCAGCATCGA ACTGATGCTG
ACGAATGCGA GTTATAATGT TTATCGCACC GATATGGGCG AGGAAGGCAT CGACCTTGCC
AAGCTCTACG ACTACGACCT GATCCTGCTG GACCTGGACC TGCCCGACAT GCACGGGATG
GAGGTCTTGC GCCAGATCCG CATGTCGCGC ATCGATACGC CGATCCTGAT CCTGACCGGC
TCGGACGATA CCGAAAGCAA GCTGCGCGGC TTCGGCTTCG GTGCCGACGA CTACATGACC
AAGCCCTTCA ACCGCGATGA GCTGGTCGCC CGCATCCAGG CCATCATCCG GCGTTCCAAG
GGTCACAGCC AGTCGGTGAT CCGCACCGGC GAGATGGTGG TGAACCTGGA CGCGCGTTCG
GTCGAGGTGG GCGGACGCGC GGTCAACCTG ACCGGCAAGG AATACCAGAT CCTGGAACTC
CTCAGCCTCC GCAAGGGCAC GACGCTGACC AAGGAGATGT TCCTGAACCA CTTTTATTTT
ACCGTAACAT GTTGA
|
|---|
| Protein sequence | MRILLVEDDP TTARSIELML TNASYNVYRT DMGEEGIDLA KLYDYDLILL DLDLPDMHGM
EVLRQIRMSR IDTPILILTG SDDTESKLRG FGFGADDYMT KPFNRDELVA RIQAIIRRSK
GHSQSVIRTG EMVVNLDARS VEVGGRAVNL TGKEYQILEL LSLRKGTTLT KEMFLNHFYF
TVTC
|
|---|
| |