| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4068 |
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| Symbol | |
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| ID | 4582619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1221546 |
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| End bp | 1222415 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639771377 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_917830 |
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| Protein GI | 119386775 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.270331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.616396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAG GAAACCGATC TCAGACGGCC CAGGGCCTGA CCCTGATCGC GCCGCCCTTG
GGCTATGCGG TGCTGGTGCT GGCCGCGCCG CTGCTGACCA TCCTGGCCTA TTCCTTTTTC
AAGGACGGCT ATCTGACGGT GATCCGCGAA TTCACGCTGG AAAACTATCG CGCGGTCTGG
GCCGATCCGA TCTTTCACCG CATCATGCTG CGCTCGCTTG TCGTGGCGGC GCTGGTGACG
CTGGCGACCG TGGTGCTGGC CTTTCCGGTG GCCTATTTCC TGTCCTTCGC GGTCTCGCCG
CAGAAAAAGG CCATGTGGCT GTTCCTGATC ACCATCCCGT TCTGGACCAG CTACCTGATC
CGGGTTTTCC TGTGGAAGGT GATCCTGGGC TATAACGGCG TGATCAATTC GGGGCTCAAG
ACGCTGGGCA TCATCGAGCA GCCGCTGACC TTCATCCTCT ACAACGTGAA CTCGATGGTC
ATCACGCTGG CCCATGCCTA TGCGCCCTTT GCCATCCTGC CGATCTTCAT CGCGCTGGAA
AAGATCGACC GCTCGCTGCT GGAGGCCGGG CGCGACCTGG GCGAAAGCCG GGCCATGACC
TTCTGGCGCG TCACCCTGCC GCTCGCCATG CCGGGCGTCG TGGCGGCGGC GCTGATCGTG
TTCATCCCGA CCATCGGCGA CTATGTCACG CCGGCGCTGA TCGGCGGCGG CAAGATCCCG
ATGATCGCCA ACATGATCCA GGCGCAGATG CTGGACCTCG ACAACCGGCC GATGGGCTCG
GCGCTGGCGG TGACGGCCAT GCTGATCGTC GCGGTCATCA GCCTGGTCTT CATCGCGCTG
AACCGCCGCT TCCTGAGGGT GCGGCAATGA
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| Protein sequence | MASGNRSQTA QGLTLIAPPL GYAVLVLAAP LLTILAYSFF KDGYLTVIRE FTLENYRAVW
ADPIFHRIML RSLVVAALVT LATVVLAFPV AYFLSFAVSP QKKAMWLFLI TIPFWTSYLI
RVFLWKVILG YNGVINSGLK TLGIIEQPLT FILYNVNSMV ITLAHAYAPF AILPIFIALE
KIDRSLLEAG RDLGESRAMT FWRVTLPLAM PGVVAAALIV FIPTIGDYVT PALIGGGKIP
MIANMIQAQM LDLDNRPMGS ALAVTAMLIV AVISLVFIAL NRRFLRVRQ
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