| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4063 |
|---|
| Symbol | |
|---|
| ID | 4582614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1217099 |
|---|
| End bp | 1218487 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771372 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_917825 |
|---|
| Protein GI | 119386770 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.824791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.419537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGA TCAGGCTGAC GAATACCAGG ACGCGCCGGA AAGAGGTTTT CCGGCCCATC
GACCCGCAGA ATGTGCGGCT CTACCTTTGC GGGCCGACGG TCTATGACCG GGCGCATCTG
GGCAATGCCC GTCCCGTGGT GGTGATCGAC GTGCTGGTGC GGCTGCTGCG CCATCTGCTG
GGCGCGGATC ACGTCACCTA TGTGCGCAAC TTCACCGACG TGGACGACAA GATCAACGCC
ACCGCCCTGG CCCGCAAGGA GGCCGGCACC CCCGGCACGC TGGAAGAGCT GATCCGCGAG
CGCACGCATG AGACCATCGG CTGGTATCAT GCCGACATGG ATGCGCTGGG GGCCGAGCGG
CCCGATCACG AGCCGCGCGC CACGGATTAC ATCGGCGAGA TGATCGCCAT GATCGAGACG
CTGATCGCCG GCGGCCACGC CTATGCCCGG GATGGCCATG TGCTGTTCCG CGTGCGCTCC
TACGCCGATT ACGGCAAGCT CTCGGGGCGT TCGGTGGACG ACATGATCGC CGGCGCCCGG
GTCGAGGTCG CGCCCTTCAA GGAAGACCCG ATGGACTTCG TGCTGTGGAA GCCGTCGGAC
GACGAGCTGC CCGGCTGGGA CAGTCCCTGG GGTCGGGGCC GTCCGGGCTG GCATATCGAA
TGCTCGGCCA TGTCCTATGA ACTGCTGGGC GAAAGCTTCG ACATCCATGC CGGCGGGATC
GACCTGCAAT TCCCGCATCA CGAGAACGAG ATCGCGCAAA GCTGCTGCGC CCATCCGCAC
GGGGATTTCG CCCGCGTCTG GCTGCATAAC GAGATGCTGC AGGTCGAGGG CAGGAAGATG
TCCAAGAGCC TGGGCAATTT CTTCACCGTC CGCGATCTGT TGGACCAGGG TATCCCGGGC
GAGGTGATCC GCTTCGTGCT GCTGTCGACG CATTACCGCA AGCCGATGGA CTGGACGGCC
GAAAAGGCGC GCGAGGCCGA AGCCGTGCTG CGCCGCTGGC GCGGCCTTGT CGCCGGCGTC
GAGCCCGCGC CAGGCCCGGC CCCCGCCGTC GTCGCGGCGC TTGCCGACGA CCTCAATACC
GCGGGGGCGA TCGCGGCCTT GCACGAGATG GCGGGGCAGG GCGACGGTCC CGGCCTTTTG
GCCGGCGCCC GGATGCTGGG GCTGCTGACC GAGGATCTGG GCGGCTGGAT CGCCGAAGGC
CCCGACCTGT CGGCGCTGAC CGAACGCATG GCCGCGCTGC GCGCCGATGC CAAGGCCAGC
AAGGATTTCT CGGCCGTGGA TGCGCTCAAG CAGCGTCTTC TGGATGCGGG GGTCGAGGTC
CGCATGAGCG CCGCCGGGGT CGAGCTTCTG CCCGGCCCGG ATTTCGACGC CGCGAAACTG
CCCGAATAA
|
|---|
| Protein sequence | MVEIRLTNTR TRRKEVFRPI DPQNVRLYLC GPTVYDRAHL GNARPVVVID VLVRLLRHLL
GADHVTYVRN FTDVDDKINA TALARKEAGT PGTLEELIRE RTHETIGWYH ADMDALGAER
PDHEPRATDY IGEMIAMIET LIAGGHAYAR DGHVLFRVRS YADYGKLSGR SVDDMIAGAR
VEVAPFKEDP MDFVLWKPSD DELPGWDSPW GRGRPGWHIE CSAMSYELLG ESFDIHAGGI
DLQFPHHENE IAQSCCAHPH GDFARVWLHN EMLQVEGRKM SKSLGNFFTV RDLLDQGIPG
EVIRFVLLST HYRKPMDWTA EKAREAEAVL RRWRGLVAGV EPAPGPAPAV VAALADDLNT
AGAIAALHEM AGQGDGPGLL AGARMLGLLT EDLGGWIAEG PDLSALTERM AALRADAKAS
KDFSAVDALK QRLLDAGVEV RMSAAGVELL PGPDFDAAKL PE
|
|---|
| |