Gene Pden_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4058 
Symbol 
ID4582609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1211023 
End bp1212438 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content70% 
IMG OID639771367 
Producthypothetical protein 
Protein accessionYP_917820 
Protein GI119386765 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.773512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT TCGACAACAG CTATGCCCGA CTGCCCGAAG GTTTCTTTAC CCGCACCCGC 
CCGACGCCGG TGCGCGATCC CAAGCTGGTC GCGCTGAACC GGCCGCTGGC CGAGCGCCTG
GGCTTCGACG CCGTCTGGCT TGCCGGCCCC GAGGGGGTGG CGATGCTGGC CGGAAACACC
CTGCCCGAGG GGGCCGAGCC CATCGCCCAG GCCTATGCCG GCCATCAGTT CGGCGGCTTC
GTGCCGCAGC TTGGCGACGG GCGCGCGGTC CTGCTGGGCG AGGTGGTCGC GCCGGATGGC
GCACGCTTCG ACATCCAGCT CAAGGGCGCG GGTCCGACGC CGTTCTCGCG CCGGGGCGAC
GGGCGGGCCT GGCTGGGGCC GGTGCTGCGC GAATATCTGG TCAGCGAGTT CATGGCGGCC
TTCGGCATCC CGACCACGCG GGCCCTGGCG GCCGTCACCA CCGGCGAGAC GGTGATCCGC
GAGACGCTGC TGCCCGGCGC GGTGCTGACC CGCGTCGCCG CCAGCCATAT CCGCGTCGGC
ACCTTCGAGT TCTATGCCGC GCGCGGCGAC CGGCAACGGT TGCAACTGCT GGCCGATCAC
GTCATCGCCC GGCACTATCC CGATGCCTCG GGCGCGGCCG ACCTGCTGCA GCGCGTGGTC
GAGCGGCAGG CGGCGACCAT CGCCGGCTGG ATGGCGCTCG GCTTCATCCA CGGGGTGATG
AATACCGACA ACATGTCGGT CTCGGGCGAG ACCATCGATT ACGGCCCCTG CGCCTTCATG
GACGGCTACC GGCCCGACAA GGTGTTCAGC TCGATCGACG CCCATGGCCG CTATGCCTGG
AACGAACAGC CGAACATCGC GGTCTGGAAC CTGGCGCAAT TCGCCAGTTG CCTGGTGCCT
CTGATGGGCA ATGACGACGC GGCGGTGGCC GAAGCGACGC GTATCGTCCA CAGCTTTCCC
GAACTCTATC AGGCCGAATG GCTCAGGCGC TTTGCCGCCA AGCTGGGCAT CGCCGCCCCA
CGGCCCGAGG ACCGCGCGCT CATCGAGCGA CTGCTGACGC TGATGGCGGC CGACGAGGCG
GATTTCACCC GCAGCTTCGC CGGGCTGGCG GATGGCCGCG CACGCGACGA ATTCAAGGCG
CCCGAGCAGT TCGACGCCTG GGCCGAGGGC TGGCAGGCGC GCATCCGCGA CCTTTCCGAC
GCGGCGCAGG TCATGGCACG CGCCAATCCG TGCCGCATCC CGCGCAACCA CCGCATCGAG
GAAGTGATCG CCGCCGGGCG CGAGGGCGAT TACGCGCCCT TCCATGCGCT CGACGCGGCG
CTGCGCGCAC CCTTCGAGGA CCGGCCGGAA TGGGAGGGCT ATGCGCTGGC CCCGCAGCCC
GACGAGATCG TCCGCCGCAC CTTCTGCGGC ACCTGA
 
Protein sequence
MIRFDNSYAR LPEGFFTRTR PTPVRDPKLV ALNRPLAERL GFDAVWLAGP EGVAMLAGNT 
LPEGAEPIAQ AYAGHQFGGF VPQLGDGRAV LLGEVVAPDG ARFDIQLKGA GPTPFSRRGD
GRAWLGPVLR EYLVSEFMAA FGIPTTRALA AVTTGETVIR ETLLPGAVLT RVAASHIRVG
TFEFYAARGD RQRLQLLADH VIARHYPDAS GAADLLQRVV ERQAATIAGW MALGFIHGVM
NTDNMSVSGE TIDYGPCAFM DGYRPDKVFS SIDAHGRYAW NEQPNIAVWN LAQFASCLVP
LMGNDDAAVA EATRIVHSFP ELYQAEWLRR FAAKLGIAAP RPEDRALIER LLTLMAADEA
DFTRSFAGLA DGRARDEFKA PEQFDAWAEG WQARIRDLSD AAQVMARANP CRIPRNHRIE
EVIAAGREGD YAPFHALDAA LRAPFEDRPE WEGYALAPQP DEIVRRTFCG T