| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3991 |
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| Symbol | |
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| ID | 4582542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1130270 |
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| End bp | 1131376 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639771300 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_917753 |
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| Protein GI | 119386698 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.630734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.39802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAG CCCGCCACGC CCTTGCCCCG TCCGATCCGG TCGTGGCGCG GCTGGTCGCG
GCCGGCATCA CCGCAGGAGC GATCCTGGAG CCGGCGGAAA CCGATCCGCG GCTGATGCGG
GCGGCCGTTT CGCCAGCGGC CCCGCCTGCC GACCCGCGCG GCCGGCCCTC GGTCCTGGCC
CCCGATGTCG TCGACCCCTC CGAGGCGGCG GCACCCCTGC TGCCGTCCGG CCCTGCGCTC
CGGTCCCAGC CGCTGCCGCG GGGCCGCCCG GGCGATGGGT TGCGCCTGAT CCCGCTGGCG
GGCCTTCACT GGGGCGGGCC GGTGCGGAGC CGGACCGCTC CGCCCAGCCC TCGGGTCCGG
GGCGACCATG TGCTGCTCCG CCCGACCGAG GGCATGGTCA CGATCATGTT TCCCCGCCAC
AACCACCCGC TGCCGGCCGG ACGCGTCGCC TTCATTCCGG CGGGCACGGC CTTTTCCCTG
AAGCCGCCGC CCGAGGTTCG CGGGTTGGCA CTGCTGATCC CGCCCGCGTT GTGCAAGGGC
CCGCCGTTGC CTTCGGGGTT CAGCCACGGC CAGCCGGCGG CCGAAGATGC GGACCTGCTC
GATCCGGCCC TGTTCGCGCT GGCTTCGGAG CCGCCATGCG GCCCGGCACG CCATGCCGCG
ACCGCCGGCG GGCTTGCACG GATCGCGGCG GTGCTGTCGC GGCTCGACGA CAGTCCAGCC
CGGTCCGAGC CGCCGGCCGG CGACCTCGCC CGGGCGCGGG CGCTGACCGA ACGGTTCCTG
CGTCTGGCGG GGGCGGAGCT GCCGTTGAAC CAGACCATGG CCGAGATGGC GCGGCGGCTG
GACTGCTCAC TGGCGCAGCT CGACCGTGCC TGCCGGCAAA GCCGGGGGCG CAGCGCGCTG
GAACTGCTTT ACGACCTGCG GCTGCAATGC GCGATCCGGG CGCTGCGCGA CGGCGACGGG
CCGGTGGCCG AGATTGCGGG CATGCTGGGC TATAGCGGGC CCGGGCACTT CATGCGCACC
TTCCTGGCGG CGACCGGCCG CACGCCCCAG GCTTACCGGA CGCTGATGCG CGAGCTCCAA
GGCAAGCGGC CGACCGACGG ACGCTGA
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| Protein sequence | MNEARHALAP SDPVVARLVA AGITAGAILE PAETDPRLMR AAVSPAAPPA DPRGRPSVLA
PDVVDPSEAA APLLPSGPAL RSQPLPRGRP GDGLRLIPLA GLHWGGPVRS RTAPPSPRVR
GDHVLLRPTE GMVTIMFPRH NHPLPAGRVA FIPAGTAFSL KPPPEVRGLA LLIPPALCKG
PPLPSGFSHG QPAAEDADLL DPALFALASE PPCGPARHAA TAGGLARIAA VLSRLDDSPA
RSEPPAGDLA RARALTERFL RLAGAELPLN QTMAEMARRL DCSLAQLDRA CRQSRGRSAL
ELLYDLRLQC AIRALRDGDG PVAEIAGMLG YSGPGHFMRT FLAATGRTPQ AYRTLMRELQ
GKRPTDGR
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