Gene Pden_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3963 
Symbol 
ID4582514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1101340 
End bp1102407 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content69% 
IMG OID639771272 
Productcysteine desulfurase 
Protein accessionYP_917725 
Protein GI119386670 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0421265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGG TCTATCTGGA CTGGAACGCT ACCGCGCCGC TGCGCCCCCA GGCGCGCGAG 
GCGATGCTGG CCGCGACCGG GATCGTCGGC AACCCGTCCT CGGTCCACGC CGAGGGCAGG
GCGGCGAAAT CCGCGCTGGA ACGGGCGCGC GAGGACGTCG CCACGGCGCT TGGCGCCGAG
GGGGCGGATG TGATCTTCAC CTCGGGCGCG ACCGAGGCGG CGGCACTGGC GCTTCAGGGC
CGGGGGCTGG CCTGTTCGCC GGTCGAGCAT GCCGCCGTGC TGGCCTGGTG CAATGCCTCG
CTGCGGACGG ATCAGGCGGG GCGGGTCGCG GTTCCCGATC CGGGCCGCGC GACGCTGCAA
CTCGCCAATG CCGAGACCGG CGTGATCCAG GACCTGCCGC AAGGGCTGGC GGTCAGCGAC
CTGACGCAGG CCTTCGGAAA GATCCCCTTC GCCTTCAACT GGCTGGGTAT CGAGGCCGGC
TTCGTCAGCG CCCACAAGCT GGGCGGGCCG CGCGGCATCG GCGCGCTGGT GGTGAAGCGC
GGCACCGAGG TCGAGGCGCG GATCAAGGGC GGCGGGCAGG AACAGGGCCG CCGTGCCGGG
ACCGAGAACC TGATCGGCAT CATGGGCTTT GCAGCGGCCG CAAAAGCGGC GCAGAATGAT
CTGGATCAAG GAATCGGGGA AAAAGTGTCG CAACTGCGCG ATTCCCTGAT GGCTGCTCTG
GAATCCGGGG CGGAAATGGT TACATTCCCG GGGCGCGAGG CCCGCCGCCT GCCCAATACA
TTGTCGATCC TGACGCCGGG ATGGCGCGGA GAGACGCAGG TGATGCAGAT GGACCTGGCC
GGATTTGCCG TCTCGGCAGG CTCGGCCTGT TCTTCGGGCA AGGTTCGGCC AAGTTCGGTT
CTGACGGCCA TGGGAATCGC GCCGGAATGG GCGGGCGATG CGATCCGCGT CTCGATCGGA
CCGACGACGG AGCCTGGAGA CGTGATGCGT TTTGCGGATG CCTGGCTCGC GGCCCATGGC
CGCTGGCGGC AAAGGAATGA TGGGCGGGCG ACCGCGGGAA GGGTTTGA
 
Protein sequence
MNRVYLDWNA TAPLRPQARE AMLAATGIVG NPSSVHAEGR AAKSALERAR EDVATALGAE 
GADVIFTSGA TEAAALALQG RGLACSPVEH AAVLAWCNAS LRTDQAGRVA VPDPGRATLQ
LANAETGVIQ DLPQGLAVSD LTQAFGKIPF AFNWLGIEAG FVSAHKLGGP RGIGALVVKR
GTEVEARIKG GGQEQGRRAG TENLIGIMGF AAAAKAAQND LDQGIGEKVS QLRDSLMAAL
ESGAEMVTFP GREARRLPNT LSILTPGWRG ETQVMQMDLA GFAVSAGSAC SSGKVRPSSV
LTAMGIAPEW AGDAIRVSIG PTTEPGDVMR FADAWLAAHG RWRQRNDGRA TAGRV