Gene Pden_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3959 
Symbol 
ID4582510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1096744 
End bp1097157 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID639771268 
Producthypothetical protein 
Protein accessionYP_917721 
Protein GI119386666 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCG AAAGGATTTC GGACGGGACG CCGGTCGCGG CCGTCGACAG GAAGGCTCTG 
CAAGGTGCCG TCGCCTATTC CGCGGGTCGC CTCGCCGAGG AATCGGCGGC GCGGGAATAT
CGCCGGCGCG GTTACGAGGT CATGGCCGAA CGCTGGCGCG GGCGCGGCGG CGAAATCGAC
CTGATCCTTT GCAGGGATGA CGAATACACC TTTGTCGAGG TCAAGAAATC GCGCTTTCAC
GACCGGGCGG CGGAGCGGAT CGGTGCGCGG CAGATCGCGC GAATCTGCAA TGCTGCGCTG
GAATATTGCG GGCGCCTGCC CGCCGGGCTG CTGACCGCAA TGCGCTTCGA CGCAGCCTTG
GTCGATCAGT TCGGGCGGGT CGAGATCATC GAGAATGCAT TTGGCGTGAA CTAG
 
Protein sequence
MKFERISDGT PVAAVDRKAL QGAVAYSAGR LAEESAAREY RRRGYEVMAE RWRGRGGEID 
LILCRDDEYT FVEVKKSRFH DRAAERIGAR QIARICNAAL EYCGRLPAGL LTAMRFDAAL
VDQFGRVEII ENAFGVN