| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3940 |
|---|
| Symbol | |
|---|
| ID | 4582491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1077245 |
|---|
| End bp | 1077856 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639771249 |
|---|
| Product | colicin V production protein |
|---|
| Protein accession | YP_917702 |
|---|
| Protein GI | 119386647 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAT TCACCATCAT CGACGGCATT GTCGCCGCCG TGATCATCCT CTCGGCGATC
CTGGCCTATG CGCGGGGCTT CGTGCGCGAA TCGCTGGCGA TTCTCGGCTG GATCGGCGCG
GCGGTGCTGG CCTTCATCTT CGCGCCGACG GTGCGGCCGA TGGTGGCGCA GGTTCCGGGG
CTGAACAAGT TCCTGGCCGA CAGCTGCGAA CTTGCCACCA TCGCCGGCTT CGCCGCGGTC
TTCGCGCTGG CGCTGGTGCT GTTCTCGATC ATCACGCCGC TGTTTTCCTC GGTCGTGCAG
CGTTCGGCGC TCGGCGGCGT GGATCAGGGC ATGGGGTTCC TCTTCGGGGT GGCGCGCGGC
ATCCTGCTCG TCGCCATCGC CTTCATCGTC TATGACCGGG TGATGGCGAC GCAGCCCGTG
GCGGTGGTCG AGAACTCCCG CTCGGCGCAG GTGTTCGAGC GCATGCGCGG CCAGATGGAC
CAGCAGATCC CGCAGGACGC GCCGGGTTGG GTGGTCAGCC GCTATGAACA ACTGGTGCGC
AGTTGCGTGC CCTCGGGCCA GCCGGTCGAC GCCCAAACGC CCGCCCCCAC GCCCGCCGCA
CCGGCGAATT GA
|
|---|
| Protein sequence | MDGFTIIDGI VAAVIILSAI LAYARGFVRE SLAILGWIGA AVLAFIFAPT VRPMVAQVPG
LNKFLADSCE LATIAGFAAV FALALVLFSI ITPLFSSVVQ RSALGGVDQG MGFLFGVARG
ILLVAIAFIV YDRVMATQPV AVVENSRSAQ VFERMRGQMD QQIPQDAPGW VVSRYEQLVR
SCVPSGQPVD AQTPAPTPAA PAN
|
|---|
| |