Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3930 |
Symbol | |
ID | 4582481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1066719 |
End bp | 1067429 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771239 |
Product | ABC transporter related |
Protein accession | YP_917692 |
Protein GI | 119386637 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGGC CCTATCTTTC CGCCACCGCC ATGCGCGGCG GCTATGGCAA GGCCGACATC CTGAACGGCT GCACCCTGAC GGTCGAGCGT GGCCAGATCG CCGTGATCGT CGGCCCGAAC GGCGCCGGCA AGTCCACGGC GATGAAGGCC GTCTTCGGCA TGCTGCACCT GCGCGAAGGC CAGGTGGCGC TGGCGGGCGA GGACATCACC CATCTCAGCC CGCAGGAGCG GGTGCGCAAG GGCATGGGCT TCGTGCCGCA GACCCACAAC ATCTTCCCGA CCATGACGGT CGAGGAAAAC CTGGAAATGG GCGCCTTCAT CCGCGAGGAC GACTACCGCG ACACCATGGC CCAGGTCTAT GAACTGTTCC CCGCCGTGGC CGACAAGCGC AAGCAGAACG CCGGCGAGCT CTCGGGCGGC CAGCGCCAGC AGGTCGCCGT CGGCCGGGCG CTGATGACCA AGCCCAGCCT CTTGATGCTG GACGAGCCGA CCGCCGGGGT CAGCCCCATC GTCATGGACG AGCTTTTCGA CCGCATCATC GAGGTCGCCC GCACCGGGAT TTCCATCCTG ATGGTCGAGC AGAACGCCCG GCAGGCGCTG GAGATCGCCG ATATCGGCTA TGTCCTGGTG CAGGGCGCCA ACCGTTACAC CGACAGCGGG CAGGCGTTGC TGGCCGATCC CGAAGTCCGC CGCACCTTCC TGGGGGGCTG A
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Protein sequence | MAGPYLSATA MRGGYGKADI LNGCTLTVER GQIAVIVGPN GAGKSTAMKA VFGMLHLREG QVALAGEDIT HLSPQERVRK GMGFVPQTHN IFPTMTVEEN LEMGAFIRED DYRDTMAQVY ELFPAVADKR KQNAGELSGG QRQQVAVGRA LMTKPSLLML DEPTAGVSPI VMDELFDRII EVARTGISIL MVEQNARQAL EIADIGYVLV QGANRYTDSG QALLADPEVR RTFLGG
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