Gene Pden_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3914 
Symbol 
ID4582465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1048159 
End bp1049406 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content64% 
IMG OID639771223 
Producthypothetical protein 
Protein accessionYP_917676 
Protein GI119386621 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.410571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT TCGCCGTCAT CTGGGATTGG CTCGCCTTTG CCATCCGATG GACGCATGTC 
GTCACCGCCA TCTGCTGGAT CGGTTCGTCC TTCTATTTCG TCGCCCTCGA CCTCGGGTTG
CGCAAGGTGC CCGGCCTGCC CCCCGGCGCG CATGGCGAGG AATGGCAGGT CCATGGCGGC
GGCTTCTACC ATATCCAGAA ATACCTGGTC GCGCCCGAGC GGATGCCCGA GCACCTGATC
TGGTTCAAAT GGGAAAGCTA CATGACCTGG ATCTCGGGGG CGGCGCTCCT GATGGTCACC
TATTGGGTCG GCTCCGAACT GTTCCTGATC GACCCCGCCA AGATGGATCT GGCGCCTTGG
CAGGCGATCC TGATCTCGGC CGGCTCGCTG TCGATCGGCT GGCTGATCTA TACCAACCTG
TGCAAGTCGA AGCTGGGCGA GACCCCGACC CTGCTGATGC TGATCCTGTT CGGGCTGCTG
ATGGTCATGG GCTGGGCCTA TAACCAGGTC TTCACCGGCC GCGCGGTCAT GCTGCACCTG
GGCGCCTTCA CCGCTACGAT CATGACGGCG AACGTGTTCT TCGTCATCAT GCCGAACCAG
CGCATCGTCG TCGCCGACCT CAAGGCCGGG CGTCCCGCCG ATCCGAAATA CGGCAAGATC
GCCAAGCTGC GCTCGACGCA TAACAACTAC CTGACCCTGC CGGTCGTGTT CCTGATGCTG
TCGAACCACT ATCCGCTGGC CTTCGCGACG GAATACAACT GGGTGATCGC CGGGCTGATC
TTCCTGATGG GCGTGACCAT CCGGCATTTC TTCAACACCA TGCATGCCGG CGGCGGGATG
CGCAGGTGGA CCTGGGCCGT GACCACCATC CTGTTCGTCA TCGTCATGTG GCTCTCGACC
GCGCCGATGT TCCGCCAGAC GCTGGAGGAG GCCGAGGCGC GCGTCCTGAC GCCCACGCAG
CAGGCCATGG TCGACGTGGC CGGCTGGGAC GACGCCTACA ACGCCGTCAT GGGCCGCTGC
TCGATGTGCC ATGCCAGGGA GCCCTCTTAC GAGGGCATCC ACACCGCGCC CAAGGGCGTC
CTGCTGGAGA CCCCCGACGA CATCACCCGC GCCGCGCGCG AAATCTATAT CCAGGCCGGC
GTGACCGACG CCATGCCGCC CGCCAATGTC AGCTTCATGG AGCCGCAGGA ACGGCAGGCG
ATCATCGACT GGTATCGCAG CCTGCCCAGG ACCTTTGCCC TGAACTGA
 
Protein sequence
MSDFAVIWDW LAFAIRWTHV VTAICWIGSS FYFVALDLGL RKVPGLPPGA HGEEWQVHGG 
GFYHIQKYLV APERMPEHLI WFKWESYMTW ISGAALLMVT YWVGSELFLI DPAKMDLAPW
QAILISAGSL SIGWLIYTNL CKSKLGETPT LLMLILFGLL MVMGWAYNQV FTGRAVMLHL
GAFTATIMTA NVFFVIMPNQ RIVVADLKAG RPADPKYGKI AKLRSTHNNY LTLPVVFLML
SNHYPLAFAT EYNWVIAGLI FLMGVTIRHF FNTMHAGGGM RRWTWAVTTI LFVIVMWLST
APMFRQTLEE AEARVLTPTQ QAMVDVAGWD DAYNAVMGRC SMCHAREPSY EGIHTAPKGV
LLETPDDITR AAREIYIQAG VTDAMPPANV SFMEPQERQA IIDWYRSLPR TFALN