Gene Pden_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3904 
Symbol 
ID4582455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1039059 
End bp1039898 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID639771213 
Producthypothetical protein 
Protein accessionYP_917666 
Protein GI119386611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0103239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAA GATGGCTTGC CCCCCTTGCC CTGCTGTTCT GGGCCACGGC CCTTTCGGCG 
CAGGACGAGC CCGACCCCCG GCTGGTGCGC GCGGCCGACG AGGTGGCGCT GGCCTATGTC
GTCACCGGCG ATTCCGAGGT CGATGCCGCC TCGGAAGCCG GGCTGCGCGG CCTGTCCCAG
GTCCTGACCG CCCGCACCAC CGTCGAGCCG GGCGAGCCCA TCGGCATCGA CCCCGAACAG
GACGACCTGT CGCTGCTGGC CTTCCTTTAC TGGCCGGTGA CCGAGGCGCA GGCGCCGCCC
TCGCCGCAAG CCTATGTCCG GCTGAACCAT TTCCTGCGCT CGGGCGGGAT GATCCTTTTC
GATACCCGCG ACGGCGATAT CGCCGGTCTG GGCGGGCCGG ATGGCGCGGC GGCGCTGCAG
GCGCTGGCCG CGCCGCTGGA CATCCCGCCG CTGGCGCCGG TCCCGGCCGA CCATGTGCTG
ACCCGCAGCT TCTACCTGCT CAGGGATTTC CCCGGCCGCT ACCAGGGCCG CGAGATCTGG
GCCGAGGCGC CCCCGGCCGA TGCCCAGGCG GCCGAGGGCG TGCCGTTTCG CAATCTCAAC
GACGGCGTCT CTCCGGTCAT CATCGGCGGC AATGCCTGGG CCGAGGCCTG GGCGGTGGAT
GAGAACGGCC TGCCCATGTT CAGCATCGGC TCGGGCTTCG AGGGCGAGCG CCAGCGCGAG
ATGACCTATC GTTTCGGCGT CAACCTGATC ATGTATGTGC TGACCGGGAA CTACAAATCC
GACCAGGTGC ATGTGCCGGC CCTGCTGGAG CGGCTGCGGC AGGAGGAGGT CGTGCAATGA
 
Protein sequence
MMRRWLAPLA LLFWATALSA QDEPDPRLVR AADEVALAYV VTGDSEVDAA SEAGLRGLSQ 
VLTARTTVEP GEPIGIDPEQ DDLSLLAFLY WPVTEAQAPP SPQAYVRLNH FLRSGGMILF
DTRDGDIAGL GGPDGAAALQ ALAAPLDIPP LAPVPADHVL TRSFYLLRDF PGRYQGREIW
AEAPPADAQA AEGVPFRNLN DGVSPVIIGG NAWAEAWAVD ENGLPMFSIG SGFEGERQRE
MTYRFGVNLI MYVLTGNYKS DQVHVPALLE RLRQEEVVQ