| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3875 |
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| Symbol | |
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| ID | 4582426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1009234 |
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| End bp | 1011300 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771184 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_917637 |
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| Protein GI | 119386582 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCG GCCGTCACCT CGCGGCCTCT CTGCGATGCG GCGAATTGAC CGGGCATGAT
TGTTACGCTA TCGGTTTGTC AGTCGTAATA TTGTTGCGAG GACAAATCGT GGCCGAGAAA
GACAAACCCT GGCTTTTCCG CACCTATGCG GGCCATTCGA CCGCCGAGAA ATCCAACGCA
CTTTATCGGG GCAACCTCGC CAAGGGGCAG ACCGGCCTGT CGGTGGCCTT CGACCTGCCG
ACCCAGACCG GCTATGACAG CGACCATGTG CTGGCGCGGG GCGAGGTCGG CAAGGTCGGG
GTGCCGATCT GCCATCTGGG CGACATGCGG ATGCTCTTCG ACCGGATCCC GCTTGAACAG
ATGAACACCT CGATGACCAT CAATGCGACG GCGCCCTGGC TCTTGTCGCT CTATATCGCC
GTGGCCGAGG AGCAGGGGGC CGACATCGCC AGGTTGCAAG GCACGGTGCA GAACGACATC
ATCAAGGAAT ACCTGTCGCG CGGGACCTAT ATCTGCCCGC CCAAGCCCTC GCTGCGCATG
ATCACCGACG TCGCGGCCTA TACGGCGAAG CATCTGCCGA AGTGGAACCC GATGAACGTC
TGCTCCTACC ACCTGCAAGA GGCGGGGGCG ACGCCCGAGC AGGAACTGGC CTATGCGCTG
GCCACCGGCA TCGCGGTGCT GGACGACCTC AAGGACAAGG TCGAGCCACA GGACTTTCCG
GCCATGGTCG GCCGCATCAG CTTCTTCGTG AACGCCGGTA TCCGCTTCGT GACCGAGCTG
TGCAAGATGC GCGCCTTCAC TGAGCTGTGG GACGAGATCT GCCGCGAGCG CTACGGAATC
GAGGAAGAGA AATTCCGCCG CTTCCGCTAT GGCGTGCAGG TGAACAGCCT GGGCCTGACC
GAGCAGCAGC CGGAAAACAA CGTCTATCGC ATCCTGCTGG AGATGCTGGC GGTCACGCTG
TCCAGGAACG CCCGCGCCCG CGCCGTGCAA CTGCCGGCCT GGAACGAGGC CCTGGGCCTG
CCGCGGCCCT GGGACCAGCA ATGGTCGCTG CGCATGCAGC AGATCGTCGC CTACGAGACG
GACCTGCTGG AATATGGCGA CCTCTTCGAC GGCAACCCCG TCATCGCCGC CAAGGTCGAG
GAACTGAAAT CCGGGGCCCG AGCGGAACTG GCGACGCTGG ACGAGATGGG CGGCGCCATC
GCCGCCATCG AATACATGAA GTCGCGACTG GTCGAATCGA ATGCCGAGCG CCTGAATCGC
ATCGAGGCGA ACGAAACGGT GGTCGTGGGC GTCAACCGCT GGCAGCAGGG CGAGCCCTCG
CCGCTGACCG CGGGCGACGG CGGCATCATG GTCGTCGACC CGGCGGTCGA GCAGGACCAG
ATCGCCCGGC TGCGCTCTTG GCGCGAGGCG CGCGACGAGG CGGCCGTCGA GGCCGCCCTC
GCCGCGTTGC GCGATGCCGC GCAGGCGGGA CGGAACGTGA TGCCGCCTTC GATTGCTGCC
GCCAAAGCCG GCGCCACCAC CGGCGAATGG GCGGCGGTGA TGCGGCAGGT CCATGGCGAA
TATCGCGGCC CGACCGGCGT CTCCAGCAGT CCCTCGAACC GCACAGAGGG CCTGGAGCCG
ATCCGCGAGG CGGTGGACGC TGTCAGCCGC CGTTTGGGCC GGCGGCTGAA ATTCCTGGTC
GGCAAGCCCG GCCTCGACGG CCATTCCAAC GGCGCCGAGC AGATCGCCTT CCGCGCCCGT
GACTGCGGCA TGGACATCAC CTATGAGGGC ATCCGCCTGA CCCCCGAGCA GATCGTCGCC
CGCGCCGCCG AGGACAATGC CCATGTCGTC GGCCTGTCGA TCCTCTCGGG CAGCCACCTG
CCGCTGATCG AGGAACTGAT GGAGCGCATC CGTGCCGCGG GCCTTGCACA TGTCCCGGTC
GTGGTCGGCG GCATCATCCC CGACGAGGAC GCGGCCAGGC TGCTGAAGAT GGGCGTGGCA
CGCGTCTACA CGCCCAAGGA TTTCGAGCTC AACCGCATCA TGATGGACAT CGTGGCCCTG
GTCGAGCCCG AGGAGGCTGC CGCCTGA
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| Protein sequence | MARGRHLAAS LRCGELTGHD CYAIGLSVVI LLRGQIVAEK DKPWLFRTYA GHSTAEKSNA
LYRGNLAKGQ TGLSVAFDLP TQTGYDSDHV LARGEVGKVG VPICHLGDMR MLFDRIPLEQ
MNTSMTINAT APWLLSLYIA VAEEQGADIA RLQGTVQNDI IKEYLSRGTY ICPPKPSLRM
ITDVAAYTAK HLPKWNPMNV CSYHLQEAGA TPEQELAYAL ATGIAVLDDL KDKVEPQDFP
AMVGRISFFV NAGIRFVTEL CKMRAFTELW DEICRERYGI EEEKFRRFRY GVQVNSLGLT
EQQPENNVYR ILLEMLAVTL SRNARARAVQ LPAWNEALGL PRPWDQQWSL RMQQIVAYET
DLLEYGDLFD GNPVIAAKVE ELKSGARAEL ATLDEMGGAI AAIEYMKSRL VESNAERLNR
IEANETVVVG VNRWQQGEPS PLTAGDGGIM VVDPAVEQDQ IARLRSWREA RDEAAVEAAL
AALRDAAQAG RNVMPPSIAA AKAGATTGEW AAVMRQVHGE YRGPTGVSSS PSNRTEGLEP
IREAVDAVSR RLGRRLKFLV GKPGLDGHSN GAEQIAFRAR DCGMDITYEG IRLTPEQIVA
RAAEDNAHVV GLSILSGSHL PLIEELMERI RAAGLAHVPV VVGGIIPDED AARLLKMGVA
RVYTPKDFEL NRIMMDIVAL VEPEEAAA
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