Gene Pden_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3873 
Symbol 
ID4582424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1006744 
End bp1008033 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content65% 
IMG OID639771182 
Productcrotonyl-CoA reductase 
Protein accessionYP_917635 
Protein GI119386580 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR01751] crotonyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.940122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGG ATCAACCGAC CCCGATCGCG CCCTATGACG CGCCGGAAAA GGATCTCTAC 
GAGATCGGCG AGATGCCGCC TCTGGGCTAT GTGCCCAAGC AGATGTACGC TTGGGCCATC
CGCCGCGAAC GCCATGGCGA GCCGGACAAG GCCATGCAGG TCGAGGTGGT CGAGACGCCG
CCGATCGACA GCAACGAGGT GCTGGTCCTG GTGATGGCGG CGGGCGTCAA CTACAACGGC
ATCTGGGCGG GCCTGGGCGT GCCGATCAGC CCCTTCGACG GCCACGGTGC GCCCTATCAC
ATCGCCGGCT CGGACGCCTC GGGCATCGTC TGGGCGGTGG GCGACAAGGT CAAGAACTGG
AAGGTCGGCG ACGAGGTCGT CATCCATTGC AACCAGGACG ACGGCAACGA CGAGGAATGC
AACGGCGGCG ACCCGATGTA TTCGCCCAGC CAGCGCATCT GGGGCTATGA GACGCCGGAC
GGCAGCTTCG CCCAGTTCAC CCGCGTGCAG GCCCAGCAGC TGATGAAGCG CCCGCGCCAC
CTGACCTGGG AGGAATCGGC CTGCTACACG CTGACATTGG CCACCGCCTA CCGGATGCTG
TTCGGACACG AGCCGCATGA GCTGAAGCCG GGCATGAACG TGCTGGTCTG GGGCGCCTCG
GGCGGGCTGG GCAGCTTTGC GATCCAGCTG ATCAACGCGG CGGGCGCCAA TGCCATCGGC
GTCATCAGCG ACGAGGACAA GCGCGAATTC GTGATGAGCC TGGGCGCCAA GGGTGTGATC
AACCGCAAGG ACTTCAAGTG CTGGGGGCAA TTGCCCAGGG TGAACACCCC CGAATACAAG
GAGTGGTTCA CCGAGGCGCG CAAGTTCGGC AAGGCGATCT GGGACATCAC CGGCAAGGGC
GTGAATGTCG ACATCGTCTT CGAGCACCCG GGCGAGGCCA CCTTCCCCGT CTCGACGCTG
GTCTGCAAGA AGGGCGGCAT GGTGGTGATC TGCGCCGGCA CCTCGGGCTT CAACTGCACC
TTCGACGTGC GCTACATGTG GATGCACCAG AAGCGCCTGC AGGGCAGCCA TTTCGCACAT
CTGAAACAGG CCAGCGCCGC CAACAAGCTG ATGCTGGAAC GCCGCATCGA CCCCTGCATG
TCCGAGGTCT TTCCCTGGGC CGAAATCCCG CAGGCGCATC TGAAGATGCT GCGCAACGAA
CACAAGCCCG GCAACATGGC GGTGCTGGTC CAGGCGCCGG TCACGGGCCT GCGCACCTTC
GAGGACGCGC TGGAGGCGGG GCGCCGCTGA
 
Protein sequence
MALDQPTPIA PYDAPEKDLY EIGEMPPLGY VPKQMYAWAI RRERHGEPDK AMQVEVVETP 
PIDSNEVLVL VMAAGVNYNG IWAGLGVPIS PFDGHGAPYH IAGSDASGIV WAVGDKVKNW
KVGDEVVIHC NQDDGNDEEC NGGDPMYSPS QRIWGYETPD GSFAQFTRVQ AQQLMKRPRH
LTWEESACYT LTLATAYRML FGHEPHELKP GMNVLVWGAS GGLGSFAIQL INAAGANAIG
VISDEDKREF VMSLGAKGVI NRKDFKCWGQ LPRVNTPEYK EWFTEARKFG KAIWDITGKG
VNVDIVFEHP GEATFPVSTL VCKKGGMVVI CAGTSGFNCT FDVRYMWMHQ KRLQGSHFAH
LKQASAANKL MLERRIDPCM SEVFPWAEIP QAHLKMLRNE HKPGNMAVLV QAPVTGLRTF
EDALEAGRR