| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3842 |
|---|
| Symbol | |
|---|
| ID | 4582393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 977304 |
|---|
| End bp | 978140 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639771151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917604 |
|---|
| Protein GI | 119386549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.536286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.423668 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGG CGATCTCTAC CGAACGTGTC TTCTCGCTGC CGTGCTTCGA AGGACTTCGC
CTGTTCCGCA AGTATCGGGC AAGTCATCCA GAACTTCCGC TCACCGATCT GCTTGCGCTA
ATCGAAAGCG TTGAAGCAGA CGCACACAGC CTGGATATGG AAGCATCTGT CTACCTGTCC
GGGCTCGTCG AGAAGGACTG CCCGCTCGAC GGCCATCTTT TCTACCAGGC CTGCATCAAG
GGTGTCTTGA TAAAGCACCA ACCGATTTGG GCAAAGCTCA TGCGCCAAGG CCGCAAGCGC
TTCGTCAAAA GGCTTGACCG CAACGACCAA GATATTTTCG CAGCTGCCGG TCTGATGGAG
AGCCCGACGC CACTGCATGT TGTTACCTGG TGGGATTCGG TTTCAGGCTA TGCACGCCTG
CTCACAGATC ACGAAAAAAT GGAGCAGGGA CGCGCTGCAG AAATCCTTTC GCTGGAACAT
GAGCGCAAGC GCCTTAAAGA AGTCGGCATC GATCTCGAAC CCGAATGGCC TGGATTCGAT
GATAACTTTG CAGGTTACGA TGTCCTTTCT TACGATCACG GAAACGCCGG AATCGTGAAT
AGGCTGATCG AAGTCAAATT CACCACGATT TCGCCTCTGC GCTTTATCGT GACACGCAAT
GAGTGGAACA AGGCCGTGCA GGCCGCCGAA GCCTACGTAT TTCATATCTG GGATATGAAC
CAAGCGGCGC CTGTGTTGCA CATCCGTACG GTCGCCGAAG TTGCTCCGCA CATCCCGACA
GATAGCGGCA GGGGAACTTG GACGAACACT CAAGTCCCTG TATTCACAAA CTTTTAA
|
|---|
| Protein sequence | MTAAISTERV FSLPCFEGLR LFRKYRASHP ELPLTDLLAL IESVEADAHS LDMEASVYLS
GLVEKDCPLD GHLFYQACIK GVLIKHQPIW AKLMRQGRKR FVKRLDRNDQ DIFAAAGLME
SPTPLHVVTW WDSVSGYARL LTDHEKMEQG RAAEILSLEH ERKRLKEVGI DLEPEWPGFD
DNFAGYDVLS YDHGNAGIVN RLIEVKFTTI SPLRFIVTRN EWNKAVQAAE AYVFHIWDMN
QAAPVLHIRT VAEVAPHIPT DSGRGTWTNT QVPVFTNF
|
|---|
| |