Gene Pden_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3842 
Symbol 
ID4582393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp977304 
End bp978140 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content54% 
IMG OID639771151 
Producthypothetical protein 
Protein accessionYP_917604 
Protein GI119386549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.536286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.423668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG CGATCTCTAC CGAACGTGTC TTCTCGCTGC CGTGCTTCGA AGGACTTCGC 
CTGTTCCGCA AGTATCGGGC AAGTCATCCA GAACTTCCGC TCACCGATCT GCTTGCGCTA
ATCGAAAGCG TTGAAGCAGA CGCACACAGC CTGGATATGG AAGCATCTGT CTACCTGTCC
GGGCTCGTCG AGAAGGACTG CCCGCTCGAC GGCCATCTTT TCTACCAGGC CTGCATCAAG
GGTGTCTTGA TAAAGCACCA ACCGATTTGG GCAAAGCTCA TGCGCCAAGG CCGCAAGCGC
TTCGTCAAAA GGCTTGACCG CAACGACCAA GATATTTTCG CAGCTGCCGG TCTGATGGAG
AGCCCGACGC CACTGCATGT TGTTACCTGG TGGGATTCGG TTTCAGGCTA TGCACGCCTG
CTCACAGATC ACGAAAAAAT GGAGCAGGGA CGCGCTGCAG AAATCCTTTC GCTGGAACAT
GAGCGCAAGC GCCTTAAAGA AGTCGGCATC GATCTCGAAC CCGAATGGCC TGGATTCGAT
GATAACTTTG CAGGTTACGA TGTCCTTTCT TACGATCACG GAAACGCCGG AATCGTGAAT
AGGCTGATCG AAGTCAAATT CACCACGATT TCGCCTCTGC GCTTTATCGT GACACGCAAT
GAGTGGAACA AGGCCGTGCA GGCCGCCGAA GCCTACGTAT TTCATATCTG GGATATGAAC
CAAGCGGCGC CTGTGTTGCA CATCCGTACG GTCGCCGAAG TTGCTCCGCA CATCCCGACA
GATAGCGGCA GGGGAACTTG GACGAACACT CAAGTCCCTG TATTCACAAA CTTTTAA
 
Protein sequence
MTAAISTERV FSLPCFEGLR LFRKYRASHP ELPLTDLLAL IESVEADAHS LDMEASVYLS 
GLVEKDCPLD GHLFYQACIK GVLIKHQPIW AKLMRQGRKR FVKRLDRNDQ DIFAAAGLME
SPTPLHVVTW WDSVSGYARL LTDHEKMEQG RAAEILSLEH ERKRLKEVGI DLEPEWPGFD
DNFAGYDVLS YDHGNAGIVN RLIEVKFTTI SPLRFIVTRN EWNKAVQAAE AYVFHIWDMN
QAAPVLHIRT VAEVAPHIPT DSGRGTWTNT QVPVFTNF