Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3705 |
Symbol | |
ID | 4582257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 854964 |
End bp | 855686 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639771015 |
Product | extracellular solute-binding protein |
Protein accession | YP_917468 |
Protein GI | 119386413 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.980262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC TGACGCTTGC CGCCGCAGCC TTCGCGCTGA CCGCGGGCAT GGGCATGGCG CAGACGGTGC GTATCGCCAC CGAGGGCGCT TATCCTCCCT ACAACCTCAT CAACGACCAG GGCCAGGTGG CCGGCTTCGA GGTCGATCTG GGCAATGAGC TGTGCAAGCG GGCCGAACTG CAATGCACCT GGGTCAAGAA CGACTGGGAT TCGATCATCC CCAACCTGGT TTCGTCGAAC TATGACGCGA TCATGGCGGC GATGAGCATC AACGAGGAAC GCAAGCAGGT CATCGCCTTC AGCGAGGATT ATCTGCCGCC CGCGCCCTCC TCCTACGTCG CGCTCGACGA GGGCGCCAAC CTTGAAACGG GTATCGTCGC GGTCCAGACC GGGACGGTCC AGGCGTCCCA TGTCGCCGAT ACGCAGGCCA CGATGCTGGA ATATCCCAAT ATCGACCAGG TCTTCGCCGC CGTCCGCAAC GGCGAGGCCG ACGCGGCCTT CGGCGATCAC GAGGTCATGC GCCCCTTCGT CGAGGATAGC GAGGACCTGA TCTTCGTCGG CGAACAGGTC CGGCTGGACG AGGGCATCGG CATCGGCGTG CGCCAGTCTG ACAACGAGCT GCGCGAAAAG CTGAACGCGG CCATCGGCAC GATGAAACAG GACGGCAGCC TGAACGAGCT GATCAAGAAG CATTTCGGCG AGGACGCACA GACCTACGAG TGA
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Protein sequence | MKKLTLAAAA FALTAGMGMA QTVRIATEGA YPPYNLINDQ GQVAGFEVDL GNELCKRAEL QCTWVKNDWD SIIPNLVSSN YDAIMAAMSI NEERKQVIAF SEDYLPPAPS SYVALDEGAN LETGIVAVQT GTVQASHVAD TQATMLEYPN IDQVFAAVRN GEADAAFGDH EVMRPFVEDS EDLIFVGEQV RLDEGIGIGV RQSDNELREK LNAAIGTMKQ DGSLNELIKK HFGEDAQTYE
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