Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3678 |
Symbol | |
ID | 4582230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 825984 |
End bp | 827300 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770988 |
Product | homoserine dehydrogenase |
Protein accession | YP_917441 |
Protein GI | 119386386 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCC AGAAACAGGG GCAAAACGCC TCTCCGCTTC GTCTCGGCAT CGCTGGCCTC GGGACGGTCG GCACCGGCAC CGTCAAGATC ATCCAGAAAC ACGCCGCCCT GCTGGCCCTG CGCGCCGGAA GGCCGATCGC CATCACCGCC GTCAGCGCCC GCGACCGGAT GAAGAACCGC GACGTGGACC TGTCCGGCTA TGGCTGGGAA GAGGACGCCC GTGCGCTCGC GCTGCGCGAG GACGTGGATG TCTTCGTCGA GCTGATCGGC GGCGACGAGG GCATCGCCCG CGAGGCGGTG ACCGCCGCCC TGCGTGCCGG CAAGGACGTG GTGACCGCCA ACAAGGCGCT GCTGGCGATC CACGGCCAGG AGCTGGCGGA ACTGGCCGAG GCCAATGGCC GGGTCATCCG CTTCGAGGCC GCCGTGGCGG GCGGCATCCC GGTGATCAAG GCCATGACCG AGTCGCTGGC CGGCAACGAG ATCCGCCGCG TCATGGGCGT GATGAACGGT ACCTGCAACT ATATCCTGAC CCGCATGGAA AGTGCCGGCC TGCCCTATGA GACGGTGTTC GAGGAGGCCC GCCAGCTTGG CTACCTGGAG GCCGACCCGA CGCTGGACGT GGGCGGCATC GATGCCAGCC ACAAGCTGGC GATCCTGGCG GCCATCGCCT TCGGCACGCG GCCCAGTTTC GACGCGGTCG AGATCGAGGG CATCGAGCGC GTCAGCATCG ACGACATCCG CCGCGCCGCC GACATGGGCT ATCGCATCAA GCTTCTGGGC GTGGCGCAGA TGACCGGGCG CGGGCTGGAG CAGCGCATGT CGCCCTGCCT CGTGCCCGCC GACAGCCCCT TGGGGCAATT GCAGGGCGGC ACCAACATGG TGGTGATCGA GGGCGACTCG GTCGGCCAGA TCGTGCTGCG CGGTCCGGGT GCCGGCGAAG GCCCGACCGC CAGCGCGGTG ATGTCCGACG TGGTCGAGAT CGCGCGCGGC GTGCGCATGC CCAGCTTTGG CCAGCCGGCG ACGGCCCTGG CCTCGCCGCA GCCGGCCCGC ACGGCGGTTC CGGCGGCCTA TTACATCCGC CTACAACTGA CCGACAAGCC GGGCGCGCTG GCCAAGGTGG CGACCGTTCT GGGTGATTCC GGCATCTCGA TCGACCGCAT GCGCCAATAC GGCCATTCGC GCAGCGAGGG CGTGGCGCCG GTGCTGATCG TCACCCACAA GACTACGCCC GAGGCCATAG ACCACGCCAT CGAGGCCCTG CCCCGCACCG GCGTCATCGC CGGCGAGCCG GTCGAGCTGC GCATCGAAGA GGTCTGA
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Protein sequence | MSAQKQGQNA SPLRLGIAGL GTVGTGTVKI IQKHAALLAL RAGRPIAITA VSARDRMKNR DVDLSGYGWE EDARALALRE DVDVFVELIG GDEGIAREAV TAALRAGKDV VTANKALLAI HGQELAELAE ANGRVIRFEA AVAGGIPVIK AMTESLAGNE IRRVMGVMNG TCNYILTRME SAGLPYETVF EEARQLGYLE ADPTLDVGGI DASHKLAILA AIAFGTRPSF DAVEIEGIER VSIDDIRRAA DMGYRIKLLG VAQMTGRGLE QRMSPCLVPA DSPLGQLQGG TNMVVIEGDS VGQIVLRGPG AGEGPTASAV MSDVVEIARG VRMPSFGQPA TALASPQPAR TAVPAAYYIR LQLTDKPGAL AKVATVLGDS GISIDRMRQY GHSRSEGVAP VLIVTHKTTP EAIDHAIEAL PRTGVIAGEP VELRIEEV
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