Gene Pden_3633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3633 
Symbol 
ID4582185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp784178 
End bp785338 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content65% 
IMG OID639770943 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_917396 
Protein GI119386341 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0817586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.96391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACG CGGGAATGCA GTTCGATCTG GGCGAGGACG TGAACGCGCT GCGCGAGACC 
GTGCACCGCT GGGCGCAGGA GCGGGTGAAG CCCATCGCGG CCGAGGTGGA TCGCAAGAAC
GCATTCCCGA ACGAGCTGTG GCGCGAGATG GGCGATCTGG GCCTTCTGGG CATCACCGTG
TCCGAAGAAC TTGGCGGCAG CGGCATGGGC TATCTGGCCC ATGTCGTCGC GACCGAGGAG
ATCGCCCGCG CCTCGGCCTC GGTCAGCCTG TCCTATGGCG CGCATTCGAA TCTTTGCGTG
AACCAGATCA AGCTGAACGG CACCGATGAG CAGCGGGCGA AATACCTGCC CAAGCTTTGC
TCGGGCGAGC ATGTCGGCGC GCTGGCCATG TCCGAGGAGG GTGCGGGCAG CGACGTCGTC
GGCATGAAGC TGCGCGCCGA AAAGCGCAAC GACCGCTATG TGCTGAACGG CAACAAATAC
TGGATCACCA ACGCGCCGGA CGCCCATACG CTGGTGGTCT ATGCCAAGAC CGATCCCGAG
GCGGGCAGCA AGGGCATCAC CGCCTTCATC GTCGAGCGCG GCATGAAGGG TTTCTCGACC
AGCCCGCATT TCGACAAGCT GGGCATGCGC GGCTCGAACA CCGGCGAGCT GATCTTCGAG
GATTGCGAGG TGCCCTTCGA GAACGTGCTG GGCGCCGAGG GCAAGGGCGT GCGCGTGCTG
ATGTCGGGCC TCGACTACGA GCGGCTGGTG CTGTCGGGCA TCGGCACCGG CATCATGGCC
GCCTGCCTCG ACGAGGTCAT GCCCTATGTC AAGGAGCGCA AGCAGTTCGG CCAGCCTATC
GGGTCGTTCC AGCTGATGCA GGGCAAGATC GCCGACATGT ATGTCGCGCT GAACACGGCG
CGGGCCTATG TCTACGAGGT GGCGAAGGCT TGCGACGCGG GCAAGGTTAC CCGGCAAGAC
GCGGCGGGCG CGGTGCTTTA CGCCAGCGAG CAGGCCATGG TGCAGGCGCA TCAGGCGGTG
CAGGCGCTGG GGGGTGCGGG TTTCCTCAAC GATTCGGTGG TCAGCCGGCT GTTCCGCGAT
GCCAAGCTGA TGGAGATCGG TGCCGGCACC AGCGAGATCC GCCGCATGCT GATCGGCCGC
GAGCTTCTGG GGCTGGCCTG A
 
Protein sequence
MFNAGMQFDL GEDVNALRET VHRWAQERVK PIAAEVDRKN AFPNELWREM GDLGLLGITV 
SEELGGSGMG YLAHVVATEE IARASASVSL SYGAHSNLCV NQIKLNGTDE QRAKYLPKLC
SGEHVGALAM SEEGAGSDVV GMKLRAEKRN DRYVLNGNKY WITNAPDAHT LVVYAKTDPE
AGSKGITAFI VERGMKGFST SPHFDKLGMR GSNTGELIFE DCEVPFENVL GAEGKGVRVL
MSGLDYERLV LSGIGTGIMA ACLDEVMPYV KERKQFGQPI GSFQLMQGKI ADMYVALNTA
RAYVYEVAKA CDAGKVTRQD AAGAVLYASE QAMVQAHQAV QALGGAGFLN DSVVSRLFRD
AKLMEIGAGT SEIRRMLIGR ELLGLA