Gene Pden_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3617 
SymbolrnhA 
ID4582169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp771153 
End bp771620 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content68% 
IMG OID639770927 
Productribonuclease H 
Protein accessionYP_917380 
Protein GI119386325 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.919158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGC TCTTTGCCTG GACCGACGGG GCTTGCAGCG GCAATCCCGG CCCGGGGGGC 
TGGGGCGTCC TGATGCGCGC CATGGACGGG GACCGGATGC TGAAGGAGCG CGAGCTGTCG
GGTGGCGAGG CCGAGACCAC CAACAACCGC ATGGAACTGA TGGCGGCGAT CTCGGCCCTG
GAGGCGCTGA CCCGGCCGAG CGAGATCACC GTGACCACCG ACAGCGCCTA TGTGAAGAAC
GGCGTCACGC AATGGATCCA TGGCTGGAAG AAGAACGGCT GGCGCACCGC CGACCGCAAG
CCGGTGAAGA ATGCCGATCT GTGGCAGCGG CTGGACGCGG CGCAGGCCCG GCACCAAGTG
CGCTGGGAAT GGATCAAGGG CCATGCCGGC CATCCCGAGA ACGAGCGCGC CGATGAGTTG
GCGCGGGCGG GCATGGCGCC CTTCAAGCCC GCACGGGTCT CGGGATGA
 
Protein sequence
MNALFAWTDG ACSGNPGPGG WGVLMRAMDG DRMLKERELS GGEAETTNNR MELMAAISAL 
EALTRPSEIT VTTDSAYVKN GVTQWIHGWK KNGWRTADRK PVKNADLWQR LDAAQARHQV
RWEWIKGHAG HPENERADEL ARAGMAPFKP ARVSG