| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3540 |
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| Symbol | |
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| ID | 4582095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 688822 |
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| End bp | 689940 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639770853 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_917306 |
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| Protein GI | 119386251 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.151055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.821812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TGCTTCTGGG CATCGGCCTG CTGCCCGTCC TGGCCGCTTC GGGCTCGGCC
GAAACCTGGC AGGCGACCAA CTGGATGGCG CCTGCACATA TCCTGAACGA GTTTCCCTAT
CAGCAATTCG CCAAGGATGT CGCCGAGGCG ACGGACGGGG CGATGGAGTT CGAGATCTAT
TCCTCGGGCG CGCTGGTGCC CGCCCCCACG ACGATGCAAG GCATCGCGGA CGGCGTGGCG
CAACTGGGCA TCGTCTATCC GCCCTATACG CCGTCGGAAC TGCCGCTGAA CAACACGGTG
AACGACCTGG CCTTTGTCGC CAAGGACGAT CTTGCCGCGG CCTTCGCTTG GACGGAACTG
GCCCTGACCA ATGAAAAGAT CCGCGCCGAA TGGGCAAGGA ACGGCGGCAT TTTCCTGGGC
GGTTATTCGA CGCCCTTCTA CAATTTCATC TGCATGGGCG AGATCGTCTC GCCCAAGGAT
GTCGCCGGCA AGAAGGTCCG GGTGGCGGGC ACGGCGCAAA CGGAATGGAT CCAGTCCCTG
GGCGGCGTGC CGGTTTCGGT TCCCATCGCC GATGTCTATT CCGGGCTCGA GCGCGGCTCG
ATCGACTGCA CGCTTTCGGA TGCCACCAAC CTCGACAAGG GCAACAAGTT CTGGGAGGTC
GCCAAGACCG TGAACGTGCT GCCGCAGGGC GTGGTCCTGG GCGCGACCTA TGTCTTCAAC
AAGGATTTCT GGGCCGGGCT GGAACCGGCG CAGCGGCGCG TCCTGCTGGA CAACATCGCG
CTTGGCCTGG CCCGGTCGCA GGTCGCCTAT CACGTCGGCG TCGAGGCGGC GCTGGCCGGA
TCGGCAGAGC GTGGGCTGAA GATCGGCGAG CCCACGCAGG AATTGCAGGA TACGCTGGCG
GCCTTCCAGG CGCAGGTGGT CGAAAAGCTG CCGGCCAAGG CCGTGGCCGA ACGGGGGATC
GAGGACCCGA CCGATGTGCT GGAGGAGTTC GTCGCGCTGG AGGAGAAGTG GCGCGCGCTT
GTCGCCGACG TGGACCGCAC CGATGCCGAC GCGGTCGCCG CGATCCTGAA GGCGAACCTG
TACGACAAGA TCGACGAAAA CACCTTTGGC GTCGAATGA
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| Protein sequence | MKRLLLGIGL LPVLAASGSA ETWQATNWMA PAHILNEFPY QQFAKDVAEA TDGAMEFEIY
SSGALVPAPT TMQGIADGVA QLGIVYPPYT PSELPLNNTV NDLAFVAKDD LAAAFAWTEL
ALTNEKIRAE WARNGGIFLG GYSTPFYNFI CMGEIVSPKD VAGKKVRVAG TAQTEWIQSL
GGVPVSVPIA DVYSGLERGS IDCTLSDATN LDKGNKFWEV AKTVNVLPQG VVLGATYVFN
KDFWAGLEPA QRRVLLDNIA LGLARSQVAY HVGVEAALAG SAERGLKIGE PTQELQDTLA
AFQAQVVEKL PAKAVAERGI EDPTDVLEEF VALEEKWRAL VADVDRTDAD AVAAILKANL
YDKIDENTFG VE
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