Gene Pden_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3530 
Symbol 
ID4582085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp680760 
End bp681563 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID639770843 
Productsiderophore-interacting protein 
Protein accessionYP_917296 
Protein GI119386241 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACA TGGACAGGGT CCAGATGGAG GTCGTCGGGA TACGGCACCC CTTCGCCTCG 
GTCGCGCGGC TGGTCGGGCG CATCGCGCCC TCCGACCCCG GGGCATGGCA GCCGGCCAAC
CTGGCGGTGC GCATCGAGGT CGAGACACCC GAGGGCCAGC GCCCGGTCTC GCGGATCTAT
ACCATCCGCA GCTTCGATCC CGCCGCCTGC ACGGTCGAGA TCGACTTCGT GATCCATGAC
GACGACAGTC CGGCGATGCG CTGGCTGGCG GCTGCCAGGC CCGGCACCAC GGTGTGGATG
ATCGGCCCGC GTCAGCATCT GGTCCCCGCG CAAGACCCGC TGAAACGCGT AGCGGTCTTT
GCCGACGAAA CTGCCATTCC CGCCGTCCAT GCCATTTTGA ACGCTTGGCC GGAAGGCGTT
CGCGGCAGCC TGTGGATCGA GACGGGCGAA GCCGGCGCCT TTCAGGAACT GCCGCGGCTG
CCGGGCATCG ACTATCACCT GATCCGCCGC AGCCCCGACC AGCCGGCCGG GACCACCGGG
GCACTGCTGG CCGCCGCGCG CGCCGCCATC GGCTCGGCGT GCGGCTGGAC GCTGTGGGCT
GCCGGCGAGC GGCAGGAGAT GCGCGAATTT CGCAGCCATT TCCGTGCACT GGGGCTGGCG
CGCGACGATC TGCGCGTCTT CGGCTATTGG AAGCATGGCG CCAGCAGTTC CGAGATCGAC
CGAATCCGCC TGCGCGAATA TGCCGAGATA CGCAAGCGCG GGCTGAGGCT GGAAGACCTC
GACGATGCCG AATTGCCGAT CTGA
 
Protein sequence
MRDMDRVQME VVGIRHPFAS VARLVGRIAP SDPGAWQPAN LAVRIEVETP EGQRPVSRIY 
TIRSFDPAAC TVEIDFVIHD DDSPAMRWLA AARPGTTVWM IGPRQHLVPA QDPLKRVAVF
ADETAIPAVH AILNAWPEGV RGSLWIETGE AGAFQELPRL PGIDYHLIRR SPDQPAGTTG
ALLAAARAAI GSACGWTLWA AGERQEMREF RSHFRALGLA RDDLRVFGYW KHGASSSEID
RIRLREYAEI RKRGLRLEDL DDAELPI