Gene Pden_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3526 
Symbol 
ID4582081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp675279 
End bp676580 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content69% 
IMG OID639770839 
Producthypothetical protein 
Protein accessionYP_917292 
Protein GI119386237 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGAC CAAGACTGTG CATCGGCATG TCCGTTGCCC CCACCTGGCT CAGCGGCGAG 
GGCTGGCGCC ACCAGGGCAG CGGCATCGAG GGGCTGTATT CCAGCGACCT GGCGCTTGAC
GTGGCCCGGC GGGCCGAGGC GGCGCATCTG GATTTCGTCT TTCGCCCCGA TGCCAGCTTC
CTGCCCCTGT CGGTGATGGA GCAATCCTTC GGCTTTTCCA GCCTGGACCC GACGCTGCTA
TTGGCGTCGA TCGCGCGGGA AACCAGCCGG ATCGGGTTGG TCACGACCAT CTCGACCACC
TTCGGCCATC CCTATCACGC CGCGCGCCAG CTGATGTCGC TGCATTGGCT CAGCCGGGGC
CGGGCGGGAT GGAACGTGGT CACCGCCTTG CAAGGCAACG AGAATTTCGG CCTGCCCGAC
ATGCCCTCGT CCGAGGCGCG CTATGCCCGC GCCGCGGAGT TCACCCAGGT CGTGCGCCGG
CTCTGGGGCA GTTTCCCGTC GCGCGCCCTG CTGGTCGACC GCGAGGCCGG GCATTACGCC
GATACCGACC TGATCCTGCC CATCGACCAT CAAGGCGCGA ATTTCCAAGT GCGCGGCCCG
ATGAACCTGC CGGAATATCC CGGCGCCGAC ATCCCGCTGA TGCAGGCGGG CGGCTCTGCC
CTGGGGGTCG ATTTCGCCGG GCAGGTCGCC GACATGGTCT TTGCCCAGAC GCCGGACCTG
GCCGCCGCGC TGGCGATGCG CCGACAACTG AGCGACCGCG CGCAGGCCCA TCGCCGGCAA
CCGCGCGACG TGCGGCTGCT GCCGGGCCTG AGCCTCTATC TGGGGGACAC GAGGGAAGAG
GCGCGGGCCC TTTTCCTGGC CACGCATCAC CGCCTGGACC GCCAGCAACG CATGGCGCGG
GTGCGGGATT TCCTGGGGCT GGACCTTGCC GATTGGCCCG ACGACCGGCC GATCACAAAC
GCGGACCTGC CCGAGAACCA CCGCTCGCCG CGCTGCGCCA GCCAGTGCGA CGCATTGCGG
AGGATCATCC GCGACGACCG TCCGACGCCG CCCGACCTGC TGGCGCGGCC CGAGATCCTC
GCATCGGTCC ATTGGCAGGT GATCGGGACG GTGGACGACG CCGTGGCCGA GATCGCGACC
TGGTTCCGAG CTGGCGGCAT CGACGGCTTC ATCGCCGTGC CGGGCGGCTC GGTCCGCTCG
CTGGATCTGC TGCTCGACGC GCTGATCCCA AGGCTGGTCG AGGCGGGCCT GTTCCGGTCG
CGCTATACCG CCGACACATT GCGCGGCCAT CTGGAGGACT GA
 
Protein sequence
MLRPRLCIGM SVAPTWLSGE GWRHQGSGIE GLYSSDLALD VARRAEAAHL DFVFRPDASF 
LPLSVMEQSF GFSSLDPTLL LASIARETSR IGLVTTISTT FGHPYHAARQ LMSLHWLSRG
RAGWNVVTAL QGNENFGLPD MPSSEARYAR AAEFTQVVRR LWGSFPSRAL LVDREAGHYA
DTDLILPIDH QGANFQVRGP MNLPEYPGAD IPLMQAGGSA LGVDFAGQVA DMVFAQTPDL
AAALAMRRQL SDRAQAHRRQ PRDVRLLPGL SLYLGDTREE ARALFLATHH RLDRQQRMAR
VRDFLGLDLA DWPDDRPITN ADLPENHRSP RCASQCDALR RIIRDDRPTP PDLLARPEIL
ASVHWQVIGT VDDAVAEIAT WFRAGGIDGF IAVPGGSVRS LDLLLDALIP RLVEAGLFRS
RYTADTLRGH LED