| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3489 |
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| Symbol | |
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| ID | 4582044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 635969 |
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| End bp | 636961 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639770802 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_917255 |
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| Protein GI | 119386200 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.371565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGCGCA GGATCCGGCT GAGACATGTG CAGGCCTTTG TCGAGATCGT CCGCCAGGGC
AATCTCAAGC GTGCGGCCGA GGCGCTGTAT CTGACCCAAC CGGCGATTTC GCGCACCATC
GCCGAGCTGG AGGAGATCGT CGGAGCAAGG CTGATGACCC GCAGCCGGCG CGGCGTGGCG
CTGACCGCGC AGGGCGAATT CTTCCACGGC TATGCGCTGA ACGCGCTGTC AGCGCTGTCG
CAGGGGCTGG CGGGAATTTC CGGCGAGGTG CAGGCGGCCG AGCTGTCCCT GCGGGTCGGG
GCGCTGCCTT CGGTCTTGGC GCGGCTGATG CCCGAGGTGG TCGCCGAACT GCAGCAGACC
GCGCCGCATC TGCGGCTGTC CATCGCGGAT GGCGGGCATG GGCATCTGAT GGGATTGCTG
CGTTCGGACG ACCTTGACGT GGTGATCGGC CGGCTGGGTG CGCCCGAAAC CATGCAGGGG
CTGAGCTTCA CCCAGCTTTA CCTGGAGGAT GTTGCGGTTG TGGTCCGGCC CGGCCATCCG
ATCCTGTCCG ATCCCGACCT GCGCCGGATC GGCGATTATC CGGTGATCTA CCCGACCGAG
ACCGCCGCGA TCCACCCTTT CGTGGAACGG CTGCTGATCG CGCATGGCAT CCTGCGCCCC
GCCCGGCGGA TCGAGACCGT CTCGGATGCA TTCGGCCGCG TCTTTACCCG GCAGGGCGAT
GCGGTTTGGT TCATCTCGGC CGGGGTGGTG GCGCGCGAGA TCGCCGAGGG GCGGCTGGTG
CGGCTGCCCC TGGACACGAC GCTGACGCAG GGTCCGGTCG GGCTGATGAC CCGCGCCAGC
CAGCCCGAGA CCAATGCCCA GCTGTTGTTC CGTCAGGCGG TGATGCGGGT GATCGCCGAC
GGCTTCGGGC CGCGACCAGG GCCGGGACCG GCAGATGCCG GCCCGACCCG CGGCCAGGAC
GCAGGCAAGG CCGGCCGCCG CACCGCGACC TAG
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| Protein sequence | MERRIRLRHV QAFVEIVRQG NLKRAAEALY LTQPAISRTI AELEEIVGAR LMTRSRRGVA
LTAQGEFFHG YALNALSALS QGLAGISGEV QAAELSLRVG ALPSVLARLM PEVVAELQQT
APHLRLSIAD GGHGHLMGLL RSDDLDVVIG RLGAPETMQG LSFTQLYLED VAVVVRPGHP
ILSDPDLRRI GDYPVIYPTE TAAIHPFVER LLIAHGILRP ARRIETVSDA FGRVFTRQGD
AVWFISAGVV AREIAEGRLV RLPLDTTLTQ GPVGLMTRAS QPETNAQLLF RQAVMRVIAD
GFGPRPGPGP ADAGPTRGQD AGKAGRRTAT
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