6 homologs were found in PanDaTox collection
for query gene Pden_3486 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008687  Pden_3486  hypothetical protein  100 
 
 
300 aa  613  9.999999999999999e-175  Paracoccus denitrificans PD1222  Bacteria  normal  0.660141  normal  0.215076 
 
 
-
 
NC_007925  RPC_0116  hypothetical protein  53.51 
 
 
299 aa  315  6e-85  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3772  hypothetical protein  54.52 
 
 
306 aa  315  7e-85  Caulobacter sp. K31  Bacteria  normal  normal  0.157135 
 
 
-
 
NC_009050  Rsph17029_3749  hypothetical protein  46.82 
 
 
301 aa  264  1e-69  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3023  hypothetical protein  46.49 
 
 
301 aa  260  2e-68  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3063  hypothetical protein  38.7 
 
 
281 aa  151  2e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.981004  normal  0.0355565 
 
 
-
 
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