Gene Pden_3471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3471 
Symbol 
ID4582027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp615599 
End bp616954 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content73% 
IMG OID639770785 
ProductTfuA domain-containing protein 
Protein accessionYP_917238 
Protein GI119386183 
COG category[S] Function unknown 
COG ID[COG3482] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGA TCGTCTTCGT CGGCCCCTCG CTGCGGCAGG CGGACCGCGC CGCCTTCGCG 
CAGTTCCGGT TCCTGCCGCC GGTGCAGCAG GGCGACCTCT ATCGCGCCGC GCGCCAGCGG
CCGCGGGCCA TCGGCCTGAT CGACGGGTAC TTCGACGGCG TGCCGGCGGT GTGGCACAAG
GAAGTGCTCT GGGCGATCTC GCAAGGCATC GCCGTCTTTG GCGCCGCCAG CATGGGCGCG
CTGCGCGCCG CCGAACTTGC ACCCTTCGGG ATGCGGGGCG TCGGCCGCAT CTTCCGGGAT
TTCCACGAGG GCCGGCTGAC CGACGACGAC GAGGTGGCGC TGCTTCACGG CCCGGCCGAG
ACCGGCCATG CCGCCCTGAG CGAGCCGATG GTCAATATCC GCGCCACCGC CGCCGCCGCG
CTGGCCGCGG GCATCCTTGA CGCGCCGGCG GCCGCGCATC TGCTGGCAAC GGCCAAGGCG
CTGTTCTACC AGCAGCGCGA CTGGCCCGCC ATCCTGGCGG CGGCGGAGCA GGTGCCCGCA
ACGATGCGCG ACCGGCTTGC CGCCTGGCTG CCCGACGGCC GCATCGACCA GAAGCGCGCG
GATGCGCTGG AGATGCTGCA TGTTCTTCAG GCGCATGTCG CGCGGGACGA GCCGCCCCCG
CGGGCGGAAT TCACCTTCGA ATGGACCGAA GCCTGGGCCT CGGCCCCCTG GCTCGCCGCG
CATGGCGACG GGATCGAGGC AGGGGATGCG CTGATGCTCG ACGCGCTGCG CCTGCAGGGC
GAGCCCTATC TGCGCCTGCG GCGCGCCGCC CTGCTACGGC AACTGGCCGC CGAGACCGCC
ACGCGCGAGC GGCGCGGGGT GCAGCCAGAC CATGTCGCCG AGGCCGCATT GGCGTTTCGC
CTGCCGCGCG GCCTGCTGCG CGGGCAGGAC ATCGACCGCT GGGCGGCGGA AAACGGCTTG
GATCGCCCCG GCTTCGACCG GCTGATGGCG GGGCTGGCGG GGCTCGAGGC GCTGGCACGG
GACCGCGATG CGGCGCTGGC GCCTGCGATC CTGGACCAGC TTCGGCTGGA GGGCGGCTAC
AAGGCGCTCC GCGACCGCAC CGCCAAGGCC GGGACTGCCG ATCCGCCGCT GCCGCTGCCC
CTGCTGCTGG CCTGGCATTT CCACACCCGC CTTGGCCGAG ACCTGCCCGA GGATCTGGAA
CAATACGCCG GCAGCCTGGG ATTTCGCGAT CTGGCGCATT TCCACGCCGC GCTGGCCCGC
GACCATGCGC TTTGGCTGAA AGACGGGCAG CCGGCGCCGG ATGGGACCGC AGGCCGACAA
AGCCATCGAC AGCCGCCGCC CGGCGGCTTA ACCTGA
 
Protein sequence
MSVIVFVGPS LRQADRAAFA QFRFLPPVQQ GDLYRAARQR PRAIGLIDGY FDGVPAVWHK 
EVLWAISQGI AVFGAASMGA LRAAELAPFG MRGVGRIFRD FHEGRLTDDD EVALLHGPAE
TGHAALSEPM VNIRATAAAA LAAGILDAPA AAHLLATAKA LFYQQRDWPA ILAAAEQVPA
TMRDRLAAWL PDGRIDQKRA DALEMLHVLQ AHVARDEPPP RAEFTFEWTE AWASAPWLAA
HGDGIEAGDA LMLDALRLQG EPYLRLRRAA LLRQLAAETA TRERRGVQPD HVAEAALAFR
LPRGLLRGQD IDRWAAENGL DRPGFDRLMA GLAGLEALAR DRDAALAPAI LDQLRLEGGY
KALRDRTAKA GTADPPLPLP LLLAWHFHTR LGRDLPEDLE QYAGSLGFRD LAHFHAALAR
DHALWLKDGQ PAPDGTAGRQ SHRQPPPGGL T